TBLASTN 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: genome.fa 20,089 sequences; 1,310,797,575 total letters Query= SPP00001040_2.0 # Protein # Selenophosphate synthetase (SEPHS) # Chicken Length=397 Score E Sequences producing significant alignments: (Bits) Value NOIK01001186.1 Anas zonorhyncha breed spot-billed scaffold1190, ... 236 4e-66 NOIK01000431.1 Anas zonorhyncha breed spot-billed scaffold433, w... 154 3e-38 NOIK01001012.1 Anas zonorhyncha breed spot-billed scaffold1014, ... 99.0 2e-20 NOIK01000087.1 Anas zonorhyncha breed spot-billed scaffold89, wh... 33.9 7.5 NOIK01000277.1 Anas zonorhyncha breed spot-billed scaffold279, w... 33.9 8.6 >NOIK01001186.1 Anas zonorhyncha breed spot-billed scaffold1190, whole genome shotgun sequence Length=56714 Score = 236 bits (603), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 127/237 (54%), Positives = 143/237 (60%), Gaps = 85/237 (36%) Frame = +3 Query 65 GIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMM------------------------- 99 GIGMD+CVIPLRHGGLSLVQTTD+ YP+V+DPYMM Sbjct 1812 GIGMDSCVIPLRHGGLSLVQTTDFFYPLVEDPYMMVKTPENTPKTP*KTPRAPKKPQNPP 1991 Query 100 --GRIACANVLSDLYAMGVTECDNMLMLLGVSNKMTDR---------------------- 135 GRIACANVLSDLYAMG+TECDNMLMLL VS KM+D Sbjct 1992 KKGRIACANVLSDLYAMGITECDNMLMLLSVSQKMSDEVRAPKPPEFTPK*PRAPPRDPV 2171 Query 136 ------ERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFIM-- 187 ERDKVMPLI++GF+DAAE+ GTSVTGG TVLNPW+++GGVAT VCQP++FIM Sbjct 2172 LAPPN*ERDKVMPLIVKGFRDAAEDGGTSVTGGHTVLNPWLIVGGVATVVCQPSDFIMCV 2351 Query 188 ----------------------------PDNAVPGDVLVLTKPLGTQVAVAVHQWLD 216 PD+AVPGDVLVLTKPLGTQVAV HQWLD Sbjct 2352 IFGLISALFGFFWFRFFIFFNVFLPPPRPDSAVPGDVLVLTKPLGTQVAVTAHQWLD 2522 Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 48/72 (67%), Positives = 58/72 (81%), Gaps = 0/72 (0%) Frame = +3 Query 256 AAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMF 315 AAGLM +F AHAATD+TGFG+LGHA NLA+ QR EV+FVIHNLP++A+ A+ KACG Sbjct 9045 AAGLMRSFQAHAATDVTGFGLLGHAANLARAQRREVAFVIHNLPLIARTPALCKACGGRP 9224 Query 316 GLMHGTCPETSG 327 L+ GT PETSG Sbjct 9225 PLLQGTTPETSG 9260 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 16/33 (48%), Positives = 20/33 (61%), Gaps = 0/33 (0%) Frame = +1 Query 5 ETFNPESYELDKSFRLTRFTELKGTGCKVPQDV 37 F P S L +RLT + EL+G GCKVPQ+ Sbjct 292 RPFEPASLGLAPGWRLTGYGELRG*GCKVPQET 390 >NOIK01000431.1 Anas zonorhyncha breed spot-billed scaffold433, whole genome shotgun sequence Length=671346 Score = 154 bits (389), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 73/73 (100%), Positives = 73/73 (100%), Gaps = 0/73 (0%) Frame = -1 Query 255 EAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNM 314 EAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNM Sbjct 528492 EAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNM 528313 Query 315 FGLMHGTCPETSG 327 FGLMHGTCPETSG Sbjct 528312 FGLMHGTCPETSG 528274 Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%) Frame = -2 Query 326 SGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVA 385 SGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVA Sbjct 524075 SGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVA 523896 Query 386 TQNVNPTPGATS 397 TQNVNPTPGATS Sbjct 523895 TQNVNPTPGATS 523860 Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 64/65 (98%), Positives = 65/65 (100%), Gaps = 0/65 (0%) Frame = -1 Query 1 MSVRETFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLGAV 60 MSVRE+FNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLGAV Sbjct 542508 MSVRESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENHFQEDEQFLGAV 542329 Query 61 MPRLG 65 MPRLG Sbjct 542328 MPRLG 542314 Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 52/52 (100%), Positives = 52/52 (100%), Gaps = 0/52 (0%) Frame = -2 Query 136 ERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFIM 187 ERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFIM Sbjct 534098 ERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQPNEFIM 533943 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 36/38 (95%), Positives = 37/38 (97%), Gaps = 0/38 (0%) Frame = -3 Query 100 GRIACANVLSDLYAMGVTECDNMLMLLGVSNKMTDRER 137 GRIACANVLSDLYAMGVTECDNMLMLLG+SNKMTDR R Sbjct 534994 GRIACANVLSDLYAMGVTECDNMLMLLGISNKMTDRVR 534881 Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 35/35 (100%), Positives = 35/35 (100%), Gaps = 0/35 (0%) Frame = -2 Query 65 GIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMM 99 GIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMM Sbjct 539306 GIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMM 539202 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/37 (86%), Positives = 32/37 (86%), Gaps = 0/37 (0%) Frame = -2 Query 217 IHPLARKVEQNQTSGNTGRCRASIPGSNDEYGKAESN 253 HPLARKVE NQTSGN GRCRASIPGSNDEYG AE N Sbjct 529835 FHPLARKVE*NQTSGNAGRCRASIPGSNDEYGTAEPN 529725 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/59 (61%), Positives = 42/59 (71%), Gaps = 2/59 (3%) Frame = -3 Query 184 EFIM--PDNAVPGDVLVLTKPLGTQVAVAVHQWLDIHPLARKVEQNQTSGNTGRCRASI 240 EF + PDNAVPGDVLVLTKPLGTQVAVAVHQWLDI +K +Q + + G S+ Sbjct 533188 EFFVFRPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIVSTPQKKKQGRGTWGKGDLPYSL 533012 >NOIK01001012.1 Anas zonorhyncha breed spot-billed scaffold1014, whole genome shotgun sequence Length=94084 Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 46/70 (66%), Positives = 56/70 (80%), Gaps = 0/70 (0%) Frame = -3 Query 256 AAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMF 315 AAGLM +F AHAATD+TGFG+LGHA NLA+ QR EV+FVIHNLP++A+ A+ KACG Sbjct 79361 AAGLMRSFQAHAATDVTGFGLLGHAANLARAQRREVAFVIHNLPLIARTPALCKACGGRP 79182 Query 316 GLMHGTCPET 325 L+ GT PET Sbjct 79181 PLLQGTAPET 79152 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 16/26 (62%), Positives = 21/26 (81%), Gaps = 0/26 (0%) Frame = -1 Query 251 ESNSEAAGLMHTFNAHAATDITGFGI 276 ++ AAGLM +F AHAATD+TGFG+ Sbjct 79873 DTAPPAAGLMRSFQAHAATDVTGFGV 79796 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 16/21 (76%), Positives = 19/21 (90%), Gaps = 0/21 (0%) Frame = -1 Query 256 AAGLMHTFNAHAATDITGFGI 276 AAGLM +F AHAATD+TGFG+ Sbjct 80404 AAGLMRSFQAHAATDVTGFGV 80342 >NOIK01000087.1 Anas zonorhyncha breed spot-billed scaffold89, whole genome shotgun sequence Length=2976980 Score = 33.9 bits (76), Expect = 7.5, Method: Compositional matrix adjust. Identities = 15/41 (37%), Positives = 21/41 (51%), Gaps = 0/41 (0%) Frame = -2 Query 178 TVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIH 218 VCQP E ++P PG ++ P+G +A H W D H Sbjct 1015975 AVCQPKEDLIPWFPRPGPASFVSLPVGIPLAPRRHPWRDQH 1015853 >NOIK01000277.1 Anas zonorhyncha breed spot-billed scaffold279, whole genome shotgun sequence Length=1140646 Score = 33.9 bits (76), Expect = 8.6, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 30/67 (45%), Gaps = 8/67 (12%) Frame = +2 Query 328 GLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQ 387 GL++C PR++ A CA GEG + W I + R+ + PR Q A + Sbjct 53273 GLVVCFPRQRLA-VCA-------GEGGRCWSEDIFTRAQRSQHAVRPPRAPADPEQRAAR 53428 Query 388 NVNPTPG 394 P PG Sbjct 53429 GGRPVPG 53449 Lambda K H a alpha 0.319 0.135 0.403 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 116843144777 Database: genome.fa Posted date: Oct 23, 2017 5:50 PM Number of letters in database: 1,310,797,575 Number of sequences in database: 20,089 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40