_________________________________.______________________._________________________________________________________________________________ _|*|_|*|_|*|_|*|_|*|_|*|_|*|_|*| | knownSP | secis_index:1 SeB_exonerate category:QUE_U |*|_|*|_|*|_|*|_|*|_|*|_|*|_|*|_ _________________________________|______________________|_________________________________________________________________________________ Blastx evalue: 3e-32 Query name: gi|874463044|ref|XP_012951503.1| PREDICTED: redox-regulatory protein FAM213A [Anas platyrhynchos] Query range: 1-228 (total 228) Target: /data/www-rg/seblastian_results/361635145/tempfiles/temptarget.fasta Chromosome: NOIK01000003.1:subseq_5704579,100182_ Strand: + Positions: -Exon 1 50006 50183 -Exon 2 50685 50776 -Exon 3 54251 54391 -Exon 4 55368 55532 -Exon 5 55676 55783 Redox box: YES Query MSFLPDFGIFTMGLWSVGLGAIGAAVTGIVLANTDLFLSKPEKATLEFLEEIELKTLGSE <---Intron---> QRTFKAGELWKKNGAVIMAVRRPG |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| < 501bp > |||||||||||||||||||||||| Target MSFLPDFGIFTMGLWSVGLGAIGAAVTGIVLANTDLFLSKPEKATLEFLEEIELKTLGSE QRTFKAGELWKKNGAVIMAVRRPG attccgtgataagtttggcggaggggagagcgaagttttacgagatgttggagcaatgtg caatagggctaaagggaaggcacg tcttcatgttctgtgctgtgctgcctcgtttcacatttcacaacctattaatatactgc aagctacgatgaaagctttctggcg gctatctacccgcggttttaattctgagtcttcacatgcgaagtaggtgggtgaatgaa aaatcaaaaagggttagagtgaata Query UFLCRE <---Intron---> EASELSSLKPQLSKLGVPLYAVVKEKIGTEVEDFQHYFKGEIFLDEK <---Intron---> RSFYGPRRRKMMMSG |||||| < 3474bp > ||||||||||||||||||||||||||||||||||||||||||||||| < 976bp > ||||||||||||||| Target UFLCRE EASELSSLKPQLSKLGVPLYAVVKEKIGTEVEDFQHYFKGEIFLDEK RSFYGPRRRKMMMSG ttttag ggtgcttcaccctacggcctgggagaagaggggtccttaggatcgga aattgccaaaaaatg gttgga accatcctacatcatgtctacttaaatgcataataaatagatttaaa ggtagcgggatttcg atgcag gttgtctgatggcggtctctatgaggagtagattgtccaaactgtag accttaagaaggggc * Query FFRFGVWQNFFRAWKNGYSGNLEGEGFTLGGVYVIGAGRQ <---Intron---> GVLLEHREKEFGDKVSLPSVLEAAEKIKPQASEVTK |||||||||||||||||||||||||||||||||||||||| < 143bp > |||||||||||||||||||||||||||||||||||| Target FFRFGVWQNFFRAWKNGYSGNLEGEGFTLGGVYVIGAGRQ GVLLEHREKEFGDKVSLPSVLEAAEKIKPQASEVTK ttctggtcattcgtaagtagacggggtacgggtgagggac ggccgccgagtggagacctgcggggaaaccgtggaa ttgtgtgaattgcgaagaggatagagtctggtattgcgga gtttaagaaatgaatgtccttaccaatacaccatca ccctacgatccttgatctctcgacaaccgacgtgtgaaag ttagattgaattcacctatctattggaaaataagaa Sequence until next stop: TAG * Distance CDS-SECIS: 193 ; UGA-SECIS: 622