TBLASTN 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: genome.fa
           20,089 sequences; 1,310,797,575 total letters



Query= SPP00000020_1.0 # Protein # Selenoprotein P (SelP) # Homo sapiens #
Complete

Length=381
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

NOIK01000317.1  Anas zonorhyncha breed spot-billed scaffold319, w...    106   2e-33
NOIK01000001.1  Anas zonorhyncha breed spot-billed scaffold1, who...    108   1e-23
NOIK01000007.1  Anas zonorhyncha breed spot-billed scaffold7, who...  35.0    3.5  


>NOIK01000317.1 Anas zonorhyncha breed spot-billed scaffold319, whole genome 
shotgun sequence
Length=965818

 Score =   106 bits (265),  Expect(2) = 2e-33, Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 77/151 (51%), Gaps = 32/151 (21%)
 Frame = +2

Query  23      DQSSLCKQPPAWSIRDQDPMLNSNGSVTVVALLQASUYLCILQASK--------------  68
               + S LC++ PAW I    PM  + G VTVVALL+AS + C+ QA +              
Sbjct  357179  NGSRLCQEAPAWQINGSSPMAEAAGQVTVVALLKAS*HFCLRQAHR*GLPPPPPPXXXGG  357358

Query  69      ------------------LEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEH  110
                                 L  LR +L ++G +++ Y++VN Q   SR  +  L+ +    
Sbjct  357359  GGGVAAVAASPQLLLPRSLGGLRQRLSRQGMADVRYMIVNEQAPLSRAMFGELQRQAPPG  357538

Query  111     IPVYQQEENQTDVWTLLNGSKDDFLIYDRCG  141
               +PV+QQ+  + DVW LL G KDDFL+YDR G
Sbjct  357539  VPVFQQQPQEPDVWQLLGGDKDDFLVYDR*G  357631


 Score = 60.1 bits (144),  Expect(2) = 2e-33, Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (2%)
 Frame = +1

Query  140     CGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSL-TTLKDEDFCKRVS  190
               CGRL +H+ LP+SFL FPYVE AI+  + +  CGNCSL      E +C+  S
Sbjct  357742  CGRLAFHIQLPYSFLHFPYVESAIRFTHSKDFCGNCSLYPNSTHEVWCRGAS  357897


>NOIK01000001.1 Anas zonorhyncha breed spot-billed scaffold1, whole genome shotgun 
sequence
Length=25320044

 Score =   108 bits (271),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 51/74 (69%), Positives = 61/74 (82%), Gaps = 0/74 (0%)
 Frame = -2

Query  66        ASKLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEHIPVYQQEENQTDVWT  125
                 +S+LEDLRVKL+ EG  NISY+VVNHQG  S+ K+  LK  VSE+I VYQQ+E+Q DVWT
Sbjct  12461329  SSRLEDLRVKLENEGLVNISYVVVNHQGAYSQKKFHLLKESVSEYITVYQQDEHQADVWT  12461150

Query  126       LLNGSKDDFLIYDR  139
                  LNG+KDDFLIYDR
Sbjct  12461149  TLNGNKDDFLIYDR  12461108


 Score = 80.9 bits (198),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 35/42 (83%), Positives = 37/42 (88%), Gaps = 0/42 (0%)
 Frame = -2

Query  139       RCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSLTTL  180
                 RCGRLVYHLGLP+SFL+F YVEEAIKIAYCE KCGNCS T  
Sbjct  12459337  RCGRLVYHLGLPYSFLSFNYVEEAIKIAYCENKCGNCSYTVF  12459212


 Score = 74.7 bits (182),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 44/68 (65%), Positives = 54/68 (79%), Gaps = 4/68 (6%)
 Frame = -3

Query  1         MWRSlglalalcllPSGGTESQDQSSLCKQPPAWSIRDQDPMLNSNGSVTVVALLQASUY  60
                 MW  LGL L LCLLP GGTE+Q+    C++PP W + +++PMLNS GSVTVVALLQAS Y
Sbjct  12463359  MWAGLGLVLVLCLLPGGGTETQN----CQEPPEWRVGEENPMLNSRGSVTVVALLQAS*Y  12463192

Query  61        LCILQASK  68
                 LC+LQAS+
Sbjct  12463191  LCLLQASR  12463168


 Score = 55.8 bits (133),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 28/51 (55%), Positives = 35/51 (69%), Gaps = 0/51 (0%)
 Frame = -3

Query  301       CCHCRHLIFEKTGSAITUQCKENLPSLCSUQGLRAEENITESCQURLPPAA  351
                 CCHCRHL+FE+ G+A+T QC+  LP+ C   G    E+ITES Q RL  AA
Sbjct  12456990  CCHCRHLLFEELGNAVT*QCRGALPNSCR*HGQLLAEDITES*Q*RLLTAA  12456838


>NOIK01000007.1 Anas zonorhyncha breed spot-billed scaffold7, whole genome shotgun 
sequence
Length=8447622

 Score = 35.0 bits (79),  Expect = 3.5, Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 24/100 (24%)
 Frame = -3

Query  97      RLKY-----THLKNKVSEHIPVYQQEENQTDVWTLLNGSKDDFLIYDRCG----------  141
               +LKY      HLK K++ H+PV  Q  NQ  +W+      D    + RCG          
Sbjct  721564  KLKYFPHC*GHLKGKINLHLPV-NQRGNQIPIWS------DHECFWTRCGDR*GSTWDPL  721406

Query  142     --RLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSLTT  179
                 RL   L  PF   TFP V          + C + S  T
Sbjct  721405  APRLTPSLTTPFWSGTFPSVPGLGVFLMIFQSCWDTSWAT  721286



Lambda      K        H        a         alpha
   0.315    0.130    0.388    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 109893366649


  Database: genome.fa
    Posted date:  Oct 23, 2017  5:50 PM
  Number of letters in database: 1,310,797,575
  Number of sequences in database:  20,089



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40