------- SECIS element -- id:1 -- grade:A ----
Chromosome = your_sequence Strand = - Positions = 47222 - 47151
Found by:  Infernal (score=35.93) Covels (score=35.45)
Stem2 length = 11   Apical loop length = 14   Insertion in stem2 = 0, 0
Free Energy = -21.24

        ..(((((((.......(((((((((((((((...............)))))))))))))))........)))))))..
model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
        ..(({(((((--....{[[(((((((((([(.....-.........)]))))))))))]]}..--..-)))))}))..
target  UCUGCUUGCA--UUUGUGAGGACAGGAACAUAAACU-AUGACCUAGGGGUUCCUGUCUGAUGU--UU-UGCAAUCAAG
                        ****           ^^^                       ****                 

------- SECIS element -- id:2 -- grade:B ----
Chromosome = your_sequence Strand = - Positions = 46551 - 46481
Found by:  Infernal (score=18.44) Covels (score=13.35)
Stem2 length = 10   Apical loop length = 10   Insertion in stem2 = 0, 0
Free Energy = -15.2

        ..(((((((.......((((((((((.(((((...............))))).))))))))))........)))))))..
model   uucggucaugcgUuaAUGAcGgccug-gcccuAAAcCcuuuuuggggcgggc-caggcCuGAUGuuuuuucaugaccggc
        ..((((((((--....([[{({((([{(((((........-----..)))))}])))})}]])..--...))))))))..
target  UACACCAUAA--CUAAUGAUGAUUUAAUAGGAAAACUCUU-----ACUCCUACGAAACCUGAAUC--UUUUUAUGGUGAA
                        ****            ^^^                        ****