_______________________________.______________________._________________________________________________________________________________
_|*|_|*|_|*|_|*|_|*|_|*|_|*|_|*| |       knownSP        |  secis_index:1     SeB_exonerate category:ALI_U |*|_|*|_|*|_|*|_|*|_|*|_|*|_|*|_
_________________________________|______________________|_________________________________________________________________________________

Blastx evalue: 2e-74
Query name: gi|874453913|ref|XP_012948388.1| PREDICTED: LOW QUALITY PROTEIN: selenoprotein P, partial [Anas platyrhynchos]
Query range: 1-377  (total 377)

Target: /data/www-rg/seblastian_results/513313956/tempfiles/temptarget.fasta
Chromosome: NOIK01000001.1:subseq_12409212,100125_ Strand: -
Positions:
-Exon 1  53957        54096
-Exon 2  51897        52109
-Exon 3  50006        50123
-Exon 4  47539        48183

Redox box: YES

Query   GTETQNCQEPPEWRVGEENPMLNSRGSVTVVALLQASUYLCLLQASR <---Intron---> LEDLRVKLENEGLVNISYVVVNHQGAYSQKKFHLLKE
       ||||||||||||||||||||||||||||||||||||||||||||||| <   1847bp   > |||||||||||||||||||||||||||||||||||||
Target  GTETQNCQEPPEWRVGEENPMLNSRGSVTVVALLQASUYLCLLQASR                LEDLRVKLENEGLVNISYVVVNHQGAYSQKKFHLLKE
       gagacatcgccgtcggggacacatagtgagggcccgattctcccgta                cggccgacgaggcgaattgggaccggttcaatcccag
       gcacaagaaccaggtgaaacttacggctcttcttacggatgttaccg                taatgtataaagttatcatttaaagcacaaatattaa
       gggcgccggccaggcgggcgggcggcgggggtccgtcacgcgggtc                aggcgaggagtaatctcgtgtcctaattcggatcagaa
                                            *                                                              
Query   SVSEYITVYQQDEHQADVWTTLNGNKDDFLIYDR <---Intron---> CGRLVYHLGLPYSFLSFNYVEEAIKIAYCENKCGNCSYT <---Intron
       |||||||||||||||||||||||||||||||||| <   1773bp   > ||||||||||||||||||||||||||||||||||||||| <   1822bp
Target  SVSEYITVYQQDEHQADVWTTLNGNKDDFLIYDR                CGRLVYHLGLPYSFLSFNYVEEAIKIAYCENKCGNCSYT           
       agtgtaagtccggccgggtaatagaaggtcatga                tgccgtccgcctttcttatggggaaagttgaatgattta           
       gtcaatctaaaaaaacatgcctagaaaatttaag                gggttaatgtcacttctaataactatcagaaaggagcac           
       ttagttcccaatatattggccatacatttcctc                acctagccgttctccgtcccaaattgtactacgtacctcg           
                                                                                                           

Query   ---> EPDIDATCENITKKADEKLAEVEPKPSGQHSNHNHQPHRHRHHHHHHRHSKNQNHQAPSETQRRHHHSSRRHRVFDHNIHDQTGSHEQVEIVPPG
          > |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Target       EPDIDATCENITKKADEKLAEVEPKPSGQHSNHNHQPHRHRHHHHHHRHSKNQNHQAPSETQRRHHHSSRRHRVFDHNIHDQTGSHEQVEIVPPG
            gcgaggatgaaaaagggacggggcacagcctacaccccacacccccccctaacaccgctgacaccccaacccagtgcaacgcagacgcggagccg
            acataccgaatcaacaaatcatacacggaacaaaaacagagaaaaaagacaaaaaacccacaggaaaggggagttaaataaacggaaatattccg
            attttaacaccgaaatagaagagcaattacatcccaatgcaccccccttcatgctgtttataatctcctgtcattctcattgatctagaatttaa
                                                                                                           
Query   EGVEILRQDTKLUKKGKTSXXKTSCKNQLTUNWQTASSDSTSSSUCCHCRHLLFEELGNAVTUQCHGALPNSCRUHGQLLAEDITESUQURLLTAAUESP
       ||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Target  EGVEILRQDTKLUKKG-----KTSCKNQLTUNWQTASSDSTSSSUCCHCRHLLFEELGNAVTUQCRGALPNSCRUHGQLLAEDITESUQURLLTAAUESP
       ggggacacgaactaag-----aaataactatatcagttgtataatttctcccttggcgaggatctcggccattatcgcctgggaagttctcccaggtgtc
       agtattgaacatgaag-----acggaaatcgagaccccacccgggggaggatttaatgactcgagggctcacgggagattcaatcacgaggttcccgacc
       atgattaataaaaaag-----acctacgacatggaatacaactcattttactgtagaattctagtcaatattcgaccggaagcctacagatgcttcagaa
                   *                 *             *                 *           *            * *      *   

Query   AAGASETSDTUQUQERAGNUAUKTN
       |||||||||||||||||||||||||
Target  AAGASETSDTUQUQERAGNUAUKTN
       ggggagaagatctcgaggatgtaaa
       ccgcgacgacgagaagcgagcgaca
       aaaatatcccagagagaacaaaaac
                 * *      * *   
Sequence until next stop: 
TAA
* 
Distance CDS-SECIS: 316 ; UGA-SECIS: 325