_|*|_|*|_|*|_|*|_|*|_|*|_|*|_|*| |       knownSP        |  secis_index:1     SeB_exonerate category:QUE_U |*|_|*|_|*|_|*|_|*|_|*|_|*|_|*|_
_________________________________|______________________|_________________________________________________________________________________

Blastx evalue: 8e-17
Query name: gi|902901476|ref|XP_013039756.1| PREDICTED: selenoprotein N [Anser cygnoides domesticus]
Query range: 2-394  (total 394)

Target: /data/www-rg/seblastian_results/327448701/tempfiles/temptarget.fasta
Chromosome: NOIK01000279.1:subseq_1,71841_ Strand: -
Positions:
-Exon 1  21629        21784
-Exon 2  20617        20741
-Exon 3  19672        19809
-Exon 4  18870        18951
-Exon 5  17728        17916
-Exon 6  16347        16452
-Exon 7  15404        15516
-Exon 8  14628        14729
-Exon 9  13267        13434

Redox box: no

Query   SVMLAKQFKAFLPPKNKLDLGDPWWIIPSELNIFTGYLSNNRFYPPPPKGKE <---Intron---> ITIHRLLSMFHPRPFVKTRFAPQGSVACIQAI
       |||||| ||||||||||/|||||||||||||||||||||||||||||||||| <   887bp    > ||||||||||||||||||||||||||||||||
Target  SVMLAKHFKAFLPPKNKVDLGDPWWIIPSELNIFTGYLSNNRFYPPPPKGKE                ITIHRLLSMFHPRPFVKTRFAPQGSVACIQAI
       agacgactagtcccaaaggcggcttaacagtaatagtctaaattccccagag                aaacaccaatcccctgaactgccgtggtacga
       gtttcaatacttccaaatatgacggttcgatattcgatcaagtaccccagaa                tctagttgttacgcttacgtccagctcgtact
       tagtcactactttagtatttgtgggaattagccctgtttccatctgtcgcag                caccatgcgccacctaaccttcgatgctcacc
                                                                                                           

Query   STFYYAIAFR <---Intron---> IHAEFQLNEPPNFPFWFSPGQFTGHIILSKDSSHVREFKLFVPNNR <---Intron---> SLNVDMEWLYGA
       |||||||||| <   807bp    > |||||||||||/|||||||||||||||||||||||||||||||||| <   720bp    > ||||||||||||
Target  STFYYAIAFR                IHAEFQLNEPPDFPFWFSPGQFTGHIILSKDSSHVREFKLFVPNNR                SLNVDMEWLYGA
       aatttgagta                acggtccagccgtcttttcgctagcaactagttcgcgtactgcaaa                tcaggagtctgg
       gctaactctg                tacatataaccatctgtccgatcgatttcaaccatgatatttcaag                ctatatagtagc
       cccctcaac                gcctgcggtgaacctcgttacgcaacccccgttctcagtgctctcc                gcgcttggggtgg
                                                                                                           

Query   SESSNMEVDIGYLPQ <---Intron---> MELESTGPSVPSVIYDENGNVIDSRDPSGEPIQFVFEEITWQQEIPWEVAAQKLEVAMYPFKK <---I
       ||||||||||||||| <   953bp    > |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| <   1
Target  SESSNMEVDIGYLPQ                MELESTGPSVPSVIYDENGNVIDSRDPSGEPIQFVFEEITWQQEIPWEEAAQKLEVAMYPFKK      
       agaaaagggagtccc                agcgtagctgctgatggagagagaagctggcactgtggaatccgactggggcacgggatctaa      
       gaggatatatgatca                tataccgcctccttaaaagattaggaccgactatttaatcgaaatcgaaccaatatctactaa      
       tacccgagtatcgtg                gggacagaatctgcttatatctccatcaggttgtttagacgggaccgagacgggagcgtgtgg      
                                                                                                           

Query   ntron---> VSYFPFTQAFERAKAEKKLVHSILLWGALDDQSCUG <---Intron---> SGRTLRETVLESSPILALLNESFISSWSLVKELEELQ 
       275bp   > |||||||||||||||||||||||||||||||||||| <   830bp    > ||||||||||||||||||||||||||||||||||||| 
Target            VSYFPFTQAFERAKAEKKLVHSILLWGALDDQSCUG                SGRTLRETVLESSPILALLNESFISSWSLVKELEELQ 
                 gtttctacgtgagaggaacgctacctggcggctttg                tgcaccgagcgatcacgccagataaattcgagcggcc 
                 tcatctcactagcacaaattactttggctaaacgg                gcggctgacttagccttcttaagttgggcttaataata 
                 cattccaattgaaaaaggggcgcgcgtcgtcgcca                tggatcggtcgatgcctcggtgcccccgggagggaggg 
                                                   *                                                       

Query   <---Intron---> TNRENEFYSKLADLHLEKYNFPVEMIICLPNGTV <---Intron---> IHHINANYFLDITSMKPEDVESSVFSFSNNFDDPS
       <   674bp    > |||||||||||||||||||||||||||||||||| <   1193bp   > |||||||||||||||||||||||/|||||||||||
Target                 TNRENEFYSKLADLHLEKYNFPVEMIICLPNGTV                IHHINANYFLDITSMKPEDVESSIFSFSNNFDDPS
                      aaagagttaacggcccgatatcggaaatccagag                accaagatttgaataacggggaaatattaatggct
                      cagaaatagatcatataaaatctatttgtcagct                taatacaattatcctacaataggttgtcaataacc
                      ccagcgcccggtcgctgactccgggccccatcgg                tctctccccgttttggtattacccttcactttctt
                                                                                                           

Query   TATYLQFLKEGLQRAKSYMQT
       ||||||||||||||||||/||
Target  TATYLQFLKEGLQRAKSYLQT
       agatcctcaggccagattcca
       cccatattaagtagcacatac
       tatccgtggaagaaaaacggc
                            
Sequence until next stop: 
TAA
* 

Distance CDS-SECIS: 2944 ; UGA-SECIS: 3328