TBLASTN 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: genome.fa 20,089 sequences; 1,310,797,575 total letters Query= SPP00001048_2.0 # Protein # Selenoprotein I (SELENOI) # Chicken Length=400 Score E Sequences producing significant alignments: (Bits) Value NOIK01001586.1 Anas zonorhyncha breed spot-billed scaffold1593, ... 149 1e-36 NOIK01001324.1 Anas zonorhyncha breed spot-billed scaffold1328, ... 149 1e-36 NOIK01004492.1 Anas zonorhyncha breed spot-billed scaffold4541, ... 107 3e-23 NOIK01000004.1 Anas zonorhyncha breed spot-billed scaffold4, who... 107 4e-23 NOIK01000200.1 Anas zonorhyncha breed spot-billed scaffold202, w... 61.6 2e-08 NOIK01000212.1 Anas zonorhyncha breed spot-billed scaffold214, w... 59.7 8e-08 NOIK01000082.1 Anas zonorhyncha breed spot-billed scaffold84, wh... 39.3 0.16 NOIK01000025.1 Anas zonorhyncha breed spot-billed scaffold26, wh... 34.7 5.2 >NOIK01001586.1 Anas zonorhyncha breed spot-billed scaffold1593, whole genome shotgun sequence Length=30406 Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 89/94 (95%), Positives = 91/94 (97%), Gaps = 0/94 (0%) Frame = +1 Query 95 FIAYTLDGVDGKQARRTNSSTPLGELFDHGLDSWACVYFVVTVYSTFGRGSTGvsvfvly 154 +A+ DGVDGKQARRTNSSTPLGELFDHGLDSWACVYFVVTVYSTFGRGSTGVSVFVLY Sbjct 18772 LLAFFPDGVDGKQARRTNSSTPLGELFDHGLDSWACVYFVVTVYSTFGRGSTGVSVFVLY 18951 Query 155 lllwvvlfsfILSHWEKYNTGILFLPWGYDISQV 188 LLLWVVLFSFILSHWEKYNTGILFLPWGYDISQV Sbjct 18952 LLLWVVLFSFILSHWEKYNTGILFLPWGYDISQV 19053 Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 59/61 (97%), Positives = 60/61 (98%), Gaps = 0/61 (0%) Frame = +1 Query 241 KAYKNNTLKHHSVYEIMLPLVSPVLLFALCTTWIFVSPMDILEVHPRLFYFMVGTAFANI 300 +AYKNNTLKHHSVYEIMLPLVSPVLLF LCTTWIFVSPMDILEVHPRLFYFMVGTAFANI Sbjct 22387 RAYKNNTLKHHSVYEIMLPLVSPVLLFVLCTTWIFVSPMDILEVHPRLFYFMVGTAFANI 22566 Query 301 S 301 S Sbjct 22567 S 22569 Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/72 (83%), Positives = 66/72 (92%), Gaps = 0/72 (0%) Frame = +3 Query 296 AFANISCQLIVCQMSSTRCQPLNWMLLPIALVLFMVMSGFAPSSEtlllylltafltlAH 355 +F + CQLIVCQMSSTRCQPLNWMLLPIALVL +V+SGFAP+SETLLLYLLTAFLTLAH Sbjct 23325 SFLSPQCQLIVCQMSSTRCQPLNWMLLPIALVLSVVVSGFAPNSETLLLYLLTAFLTLAH 23504 Query 356 IHYGVVVVSQLS 367 IHYGVVVV +L Sbjct 23505 IHYGVVVVGELG 23540 Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 43/58 (74%), Positives = 43/58 (74%), Gaps = 11/58 (19%) Frame = +2 Query 189 TISIVYIVTAIVGVEAWYAPFLFNFLYRDLFTTMII-------ACALTVTL----PMS 235 TISIVYIVTAIVGVEAWYAPFLFNFLYRDLFTTMII AC L L PMS Sbjct 20303 TISIVYIVTAIVGVEAWYAPFLFNFLYRDLFTTMIIGKKLHVEACLLNTNLFSQHPMS 20476 Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/38 (92%), Positives = 37/38 (97%), Gaps = 0/38 (0%) Frame = +2 Query 363 VSQLSRHFNIRPFSLKKPTPDULGMEEEKISLRSAEVL 400 VSQLSRHFNIRPFSLKKPTPD LG+EEEKISL+SAEVL Sbjct 25559 VSQLSRHFNIRPFSLKKPTPD*LGVEEEKISLQSAEVL 25672 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/36 (78%), Positives = 31/36 (86%), Gaps = 1/36 (3%) Frame = +3 Query 13 SKYKYSAVDSNPLSLYVMHPFWNTIVKIFPTWLAPN 48 S+ +YSAVDSNPLSLYVMHPFWNTIVK+ P APN Sbjct 15948 SRSQYSAVDSNPLSLYVMHPFWNTIVKVRPR-PAPN 16052 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 24/28 (86%), Positives = 27/28 (96%), Gaps = 0/28 (0%) Frame = +1 Query 74 ASAPDHQHVPNGVWVVVGLLNFIAYTLD 101 ++APDHQHVPNGVWV+VGLLNFIAYTL Sbjct 18217 SAAPDHQHVPNGVWVIVGLLNFIAYTLG 18300 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 17/17 (100%), Positives = 17/17 (100%), Gaps = 0/17 (0%) Frame = +3 Query 225 ACALTVTLPMSLYNFYK 241 ACALTVTLPMSLYNFYK Sbjct 21894 ACALTVTLPMSLYNFYK 21944 >NOIK01001324.1 Anas zonorhyncha breed spot-billed scaffold1328, whole genome shotgun sequence Length=50293 Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 89/93 (96%), Positives = 91/93 (98%), Gaps = 0/93 (0%) Frame = +1 Query 96 IAYTLDGVDGKQARRTNSSTPLGELFDHGLDSWACVYFVVTVYSTFGRGSTGvsvfvlyl 155 +A+ DGVDGKQARRTNSSTPLGELFDHGLDSWACVYFVVTVYSTFGRGSTGVSVFVLYL Sbjct 8410 LAFFPDGVDGKQARRTNSSTPLGELFDHGLDSWACVYFVVTVYSTFGRGSTGVSVFVLYL 8589 Query 156 llwvvlfsfILSHWEKYNTGILFLPWGYDISQV 188 LLWVVLFSFILSHWEKYNTGILFLPWGYDISQV Sbjct 8590 LLWVVLFSFILSHWEKYNTGILFLPWGYDISQV 8688 Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 43/58 (74%), Positives = 43/58 (74%), Gaps = 11/58 (19%) Frame = +2 Query 189 TISIVYIVTAIVGVEAWYAPFLFNFLYRDLFTTMII-------ACALTVTL----PMS 235 TISIVYIVTAIVGVEAWYAPFLFNFLYRDLFTTMII AC L L PMS Sbjct 9944 TISIVYIVTAIVGVEAWYAPFLFNFLYRDLFTTMIIGKKLHVEACLLNTNLFSQHPMS 10117 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/36 (78%), Positives = 31/36 (86%), Gaps = 1/36 (3%) Frame = +1 Query 13 SKYKYSAVDSNPLSLYVMHPFWNTIVKIFPTWLAPN 48 S+ +YSAVDSNPLSLYVMHPFWNTIVK+ P APN Sbjct 5560 SRSQYSAVDSNPLSLYVMHPFWNTIVKVRPR-PAPN 5664 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 24/28 (86%), Positives = 27/28 (96%), Gaps = 0/28 (0%) Frame = +2 Query 74 ASAPDHQHVPNGVWVVVGLLNFIAYTLD 101 ++APDHQHVPNGVWV+VGLLNFIAYTL Sbjct 7856 SAAPDHQHVPNGVWVIVGLLNFIAYTLG 7939 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/37 (97%), Positives = 36/37 (97%), Gaps = 0/37 (0%) Frame = +2 Query 40 IFPTWLAPNLITFSGFLLLVFNFFLMAYFDPDFYASA 76 IFPTWLAPNLITFSGFLLLVFNFFLMAYFDPDFYAS Sbjct 5981 IFPTWLAPNLITFSGFLLLVFNFFLMAYFDPDFYASG 6091 >NOIK01004492.1 Anas zonorhyncha breed spot-billed scaffold4541, whole genome shotgun sequence Length=27523 Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/90 (67%), Positives = 73/90 (81%), Gaps = 2/90 (2%) Frame = +2 Query 101 DGVDGKQARRTNSSTPLGELFDHGLDSWACVYFVVTVYSTFGR--GSTGvsvfvlylllw 158 D +DGK ARRT SS+PLGELFDHGLDSWA FV++ +S R G TGVSV+ +Y+ L Sbjct 26867 DSIDGKHARRTQSSSPLGELFDHGLDSWATSIFVLSFFSVCSRDNGKTGVSVYTMYIYLS 27046 Query 159 vvlfsfILSHWEKYNTGILFLPWGYDISQV 188 +VLF+F+ SHWEKYNTG+LFLPWGYD+SQV Sbjct 27047 IVLFNFMCSHWEKYNTGVLFLPWGYDLSQV 27136 >NOIK01000004.1 Anas zonorhyncha breed spot-billed scaffold4, whole genome shotgun sequence Length=10633831 Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 60/90 (67%), Positives = 73/90 (81%), Gaps = 2/90 (2%) Frame = -3 Query 101 DGVDGKQARRTNSSTPLGELFDHGLDSWACVYFVVTVYSTFGR--GSTGvsvfvlylllw 158 D +DGK ARRT SS+PLGELFDHGLDSWA FV++ +S R G TGVSV+ +Y+ L Sbjct 1586060 DSIDGKHARRTQSSSPLGELFDHGLDSWATSIFVLSFFSVCSRDNGKTGVSVYTMYIYLS 1585881 Query 159 vvlfsfILSHWEKYNTGILFLPWGYDISQV 188 +VLF+F+ SHWEKYNTG+LFLPWGYD+SQV Sbjct 1585880 IVLFNFMCSHWEKYNTGVLFLPWGYDLSQV 1585791 Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 0/73 (0%) Frame = -2 Query 301 SCQLIVCQMSSTRCQPLNWMLLPIALVLFMVMSGFAPSSEtlllylltafltlAHIHYGV 360 C++IVCQMSSTR + L+W L P+ALV++ +SG +E +L TA +T AH+HYG+ Sbjct 1564206 QCKVIVCQMSSTRPELLHWFLFPLALVVYAAISGLLGWAEEAVLAAFTALVTAAHVHYGI 1564027 Query 361 VVVSQLSRHFNIR 373 VV R+ R Sbjct 1564026 CVVRGQLRNNRAR 1563988 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 0/60 (0%) Frame = -2 Query 240 YKAYKNNTLKHHSVYEIMLPLVSPVLLFALCTTWIFVSPMDILEVHPRLFYFMVGTAFAN 299 Y+A+ TLK+ S+YE +LPLVSP+LLF L T W+ +SP +IL PRLF +MVG F+N Sbjct 1566861 YRAHLKKTLKNGSLYEGLLPLVSPLLLFVLLTVWVVLSPGNILAKQPRLFLWMVGVTFSN 1566682 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 32/38 (84%), Gaps = 0/38 (0%) Frame = -3 Query 39 KIFPTWLAPNLITFSGFLLLVFNFFLMAYFDPDFYASA 76 +I P W+APNL+TFSGF++++ N+FL++++D D+ AS Sbjct 1593347 QIVPLWIAPNLLTFSGFVMILVNYFLISFYDWDYTASG 1593234 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 17/29 (59%), Positives = 23/29 (79%), Gaps = 0/29 (0%) Frame = -1 Query 12 FSKYKYSAVDSNPLSLYVMHPFWNTIVKI 40 F +Y+AVD+NPLS+YVM P WN I+K+ Sbjct 1597942 FFSLQYNAVDTNPLSVYVMQPIWNKIIKV 1597856 >NOIK01000200.1 Anas zonorhyncha breed spot-billed scaffold202, whole genome shotgun sequence Length=1566756 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/44 (66%), Positives = 33/44 (75%), Gaps = 2/44 (5%) Frame = -3 Query 86 VWVVVGLLNFIAYTLDGVDGKQARRTNSSTPLGELFDHGLDSWA 129 + GL FI +LD +DGKQARRTNSSTPLGELFDHG DS + Sbjct 1431766 IACACGL--FIYQSLDAIDGKQARRTNSSTPLGELFDHGCDSLS 1431641 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 22/67 (33%), Positives = 36/67 (54%), Gaps = 1/67 (1%) Frame = -1 Query 4 VTAEQLAGFSKYKYSAVDSNPLSLYVMHPFWNTIVKIFPTWLAPNLITFSGFLLLVFNFF 63 ++ QL ++KY + + L +M +W +V P W+APNLIT G L+ +F Sbjct 1435596 LSKHQLKRLEEHKYQSAGRSLLE-PLMQGYWEWLVGRVPAWIAPNLITIIGLLINIFTTL 1435420 Query 64 LMAYFDP 70 L+ Y+ P Sbjct 1435419 LLVYYCP 1435399 >NOIK01000212.1 Anas zonorhyncha breed spot-billed scaffold214, whole genome shotgun sequence Length=1490686 Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 28/40 (70%), Positives = 33/40 (83%), Gaps = 1/40 (3%) Frame = -2 Query 89 VVGLLN-FIAYTLDGVDGKQARRTNSSTPLGELFDHGLDS 127 ++G L FI +LD +DGKQARRTNSS+PLGELFDHG DS Sbjct 51297 ILGALGLFIYQSLDAIDGKQARRTNSSSPLGELFDHGCDS 51178 Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust. Identities = 26/84 (31%), Positives = 38/84 (45%), Gaps = 9/84 (11%) Frame = -1 Query 4 VTAEQLAGFSKYKYSAVDSNPLSLYVMHPFWNTIVKIFPTWLAPNLITFSGFLLLVFNFF 63 ++ QL +++YSA + L + + P+W +V+ P WLAPN IT G LL Sbjct 59821 LSPAQLKRLEQHRYSAAGRSLLEPW-LQPYWAWLVEQLPLWLAPNAITLGGLLLNCLTAL 59645 Query 64 LMAYFDPDFYASAPDH-QHVPNGV 86 AS P + VP G Sbjct 59644 -------PLVASCPSATEQVPPGT 59594 >NOIK01000082.1 Anas zonorhyncha breed spot-billed scaffold84, whole genome shotgun sequence Length=3126957 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 22/69 (32%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Frame = -2 Query 243 YKNNTLKHHSVYEIMLPLVSP---VLLFALCTTWIFVSPMDILEVHPRLFYFMVGTAFAN 299 YKN+ K+H Y+++ L++ LL +CT P D E PR F+FM A Sbjct 2179343 YKNSNEKNHERYQVLGHLITQYVYELLERVCTLQKVYIPTDATEDEPRSFFFMSEKALTT 2179164 Query 300 ISCQLIVCQ 308 S +++ Q Sbjct 2179163 SSSIIVLLQ 2179137 >NOIK01000025.1 Anas zonorhyncha breed spot-billed scaffold26, whole genome shotgun sequence Length=5552823 Score = 34.7 bits (78), Expect = 5.2, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 30/53 (57%), Gaps = 2/53 (4%) Frame = -3 Query 178 FLPWGYDISQVTISIVYIVTAIV--GVEAWYAPFLFNFLYRDLFTTMIIACAL 228 +L +GY++ + +S YI A V G+ WY PF F+ L+ + ++ C+L Sbjct 2279911 YLCFGYNLQKSQVSCKYIF*ASVTRGLSGWYLPFYFS*LHLEFVICSLLVCSL 2279753 Lambda K H a alpha 0.328 0.140 0.450 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 118146228176 Database: genome.fa Posted date: Oct 23, 2017 5:50 PM Number of letters in database: 1,310,797,575 Number of sequences in database: 20,089 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40