------- SECIS element -- id:1 -- grade:A ---- Chromosome = your_sequence Strand = - Positions = 49464 - 49394 Found by: Infernal (score=29.12) Covels (score=15.58) Stem2 length = 9 Apical loop length = 12 Insertion in stem2 = 0, 1 Free Energy = -14.9 ..(((((((.......(((((((((((((((...............))))))).))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggcca-ggcCuGAUGuuuuuucaugaccggc .(((((((((--(...{[[{(((({(((({(.....---.......)}))))}.))))}]]}..--.)-))))))))). target UAAGCACACU--UUAGUGAAGACUACAUAGAAAACC---CCUGAGGUGUAUGCAAGUCAGAUGU--CA-GGUGUGCUUU **** ^^^ ****