TBLASTN 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: genome.fa
           20,089 sequences; 1,310,797,575 total letters



Query= SPP00001057_2.0 # Protein # Methionine-R-sufoxide reductase 3
(MSRB3) # Chicken

Length=184
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

NOIK01000269.1  Anas zonorhyncha breed spot-billed scaffold271, w...    103   3e-23
NOIK01000055.1  Anas zonorhyncha breed spot-billed scaffold57, wh...  49.7    1e-05
NOIK01000373.1  Anas zonorhyncha breed spot-billed scaffold375, w...  42.4    0.003
NOIK01000087.1  Anas zonorhyncha breed spot-billed scaffold89, wh...  37.7    0.13 
NOIK01000069.1  Anas zonorhyncha breed spot-billed scaffold71, wh...  33.1    4.4  


>NOIK01000269.1 Anas zonorhyncha breed spot-billed scaffold271, whole genome 
shotgun sequence
Length=1198376

 Score =   103 bits (257),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 51/55 (93%), Gaps = 0/55 (0%)
 Frame = +3

Query  130     QCGAHLGHIFDDGPRPTGKRYCINSASLSFKPAEKNSAGEGSGSTRPAQTGKAEL  184
               QCGAHLGHIFDDGPRPTGKRYC NSASLSFKPAEK++AGEGS ST PA TGKAEL
Sbjct  268185  QCGAHLGHIFDDGPRPTGKRYCTNSASLSFKPAEKSNAGEGSSSTSPAPTGKAEL  268349


 Score = 77.8 bits (190),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 36/37 (97%), Positives = 37/37 (100%), Gaps = 0/37 (0%)
 Frame = +3

Query  25      SGSCRDKKDCKVVFSQEELRKRLTPLQYHVTQEKGTE  61
               +GSCRDKKDCKVVFSQEELRKRLTPLQYHVTQEKGTE
Sbjct  219354  AGSCRDKKDCKVVFSQEELRKRLTPLQYHVTQEKGTE  219464


 Score = 70.9 bits (172),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 31/33 (94%), Positives = 32/33 (97%), Gaps = 0/33 (0%)
 Frame = +2

Query  98      GWPSFYDVISPDTITLTDDFSYGMHRIEISCSQ  130
               GWPSFYDVISPD ITLTDDFSYGMHRIEISCS+
Sbjct  263687  GWPSFYDVISPDAITLTDDFSYGMHRIEISCSR  263785


 Score = 60.8 bits (146),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 27/27 (100%), Positives = 27/27 (100%), Gaps = 0/27 (0%)
 Frame = +3

Query  62      SAFEGEYTHHKAQGIYKCVVCGTPLFK  88
               SAFEGEYTHHKAQGIYKCVVCGTPLFK
Sbjct  221265  SAFEGEYTHHKAQGIYKCVVCGTPLFK  221345


 Score = 56.2 bits (134),  Expect = 8e-08, Method: Compositional matrix adjust.
 Identities = 26/26 (100%), Positives = 26/26 (100%), Gaps = 0/26 (0%)
 Frame = +1

Query  1       MSAFNLLHLVTKSQPVALRACGLPSG  26
               MSAFNLLHLVTKSQPVALRACGLPSG
Sbjct  206524  MSAFNLLHLVTKSQPVALRACGLPSG  206601


>NOIK01000055.1 Anas zonorhyncha breed spot-billed scaffold57, whole genome shotgun 
sequence
Length=3901611

 Score = 49.7 bits (117),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 20/31 (65%), Positives = 24/31 (77%), Gaps = 0/31 (0%)
 Frame = +1

Query  130      QCGAHLGHIFDDGPRPTGKRYCINSASLSFK  160
                QC  HLGH+FD+GP P G+R C NS SLSF+
Sbjct  3257413  QCYGHLGHVFDNGPTPPGQRICTNSVSLSFR  3257505


>NOIK01000373.1 Anas zonorhyncha breed spot-billed scaffold375, whole genome 
shotgun sequence
Length=806883

 Score = 42.4 bits (98),  Expect = 0.003, Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 23/38 (61%), Gaps = 0/38 (0%)
 Frame = -3

Query  75      GIYKCVVCGTPLFKSETKFDSNSGWPSFYDVISPDTIT  112
               GIY C  CG  LF S  K++ +S WP+F + I  D++ 
Sbjct  433165  GIYACARCGYELFSSRAKYEHSSPWPAFTETIHEDSVA  433052


 Score = 37.7 bits (86),  Expect = 0.11, Method: Compositional matrix adjust.
 Identities = 21/47 (45%), Positives = 28/47 (60%), Gaps = 1/47 (2%)
 Frame = -2

Query  125     EISCSQCGAHLGHIF-DDGPRPTGKRYCINSASLSFKPAEKNSAGEG  170
               ++SC +CG  LGH F +DGP+    R+ I S+SL F P  K  A  G
Sbjct  432920  QVSCGKCGNGLGHEFLNDGPKRGQSRF*IFSSSLKFIPKGKGCASPG  432780


>NOIK01000087.1 Anas zonorhyncha breed spot-billed scaffold89, whole genome shotgun 
sequence
Length=2976980

 Score = 37.7 bits (86),  Expect = 0.13, Method: Compositional matrix adjust.
 Identities = 29/97 (30%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
 Frame = +2

Query  35       KVVFSQEELRKRLTPLQYHVTQEKGTESAFEGEYTHHKAQGIYKCVVCGTPLFKSETKFD  94
                + V  QEE   RLT +  H T+      AF G+     A GIYK  +C   +F  +  F 
Sbjct  1756121  EFVHIQEE---RLTLMGGH*TENSRQPKAFHGKDLKVDAIGIYK*YICFVCVFSPQLHFS  1756291

Query  95       SNSGWPSFYDVISPDTITLTDDFSYGMHRIEISCSQC  131
                +N      Y +ISP+T  +    +   +R++++C  C
Sbjct  1756292  NN------YLLISPETHCV*SMHNQTAYRLQLTCQFC  1756384


>NOIK01000069.1 Anas zonorhyncha breed spot-billed scaffold71, whole genome shotgun 
sequence
Length=3530957

 Score = 33.1 bits (74),  Expect = 4.4, Method: Compositional matrix adjust.
 Identities = 16/45 (36%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query  76      IYKCVVCGTPLFKSETKFDSNSGWPSFYDVISPDTIT-LTDDFSY  119
               I+ C+ C  PLF           +  +YD+I+PDT+T LT   +Y
Sbjct  946221  IHACINCIIPLFY*SKSISIKHQYTEYYDIITPDTMTFLTSGINY  946355



Lambda      K        H        a         alpha
   0.317    0.133    0.408    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 28681093518


  Database: genome.fa
    Posted date:  Oct 23, 2017  5:50 PM
  Number of letters in database: 1,310,797,575
  Number of sequences in database:  20,089



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40