TBLASTN 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: genome.fa 20,089 sequences; 1,310,797,575 total letters Query= SPP00001033_2.0 # Protein # Glutathione peroxidase 3 (GPx3) # Chicken Length=207 Score E Sequences producing significant alignments: (Bits) Value NOIK01000270.1 Anas zonorhyncha breed spot-billed scaffold272, w... 202 1e-75 NOIK01000992.1 Anas zonorhyncha breed spot-billed scaffold994, w... 101 7e-30 NOIK01000016.1 Anas zonorhyncha breed spot-billed scaffold16, wh... 96.3 4e-29 NOIK01000001.1 Anas zonorhyncha breed spot-billed scaffold1, who... 58.2 3e-08 NOIK01000398.1 Anas zonorhyncha breed spot-billed scaffold400, w... 57.4 4e-08 NOIK01000686.1 Anas zonorhyncha breed spot-billed scaffold688, w... 54.7 3e-07 NOIK01000121.1 Anas zonorhyncha breed spot-billed scaffold123, w... 35.0 1.3 >NOIK01000270.1 Anas zonorhyncha breed spot-billed scaffold272, whole genome shotgun sequence Length=1470655 Score = 202 bits (513), Expect(2) = 1e-75, Method: Compositional matrix adjust. Identities = 116/202 (57%), Positives = 121/202 (60%), Gaps = 61/202 (30%) Frame = +3 Query 67 ELNALQNELGPYGLVVLGFPSNQFGKQEPGQNSEILPALK-------------------- 106 ELNALQNELGPYGLVVLGFPSNQFGKQEPGQNSEILPALK Sbjct 233025 ELNALQNELGPYGLVVLGFPSNQFGKQEPGQNSEILPALK*VPQGLLMRFGAAPPVGEVW 233204 Query 107 ---YVRPGG------GFVPNFQLFQKGDVNGAKEQK------------------------ 133 Y P G P +KG G + ++ Sbjct 233205 VTPYCPPAGMSGQEAASSPTSSSSRKGM*TGPRSRRSTAS*RWVQCQRGGPAPSALSFWG 233384 Query 134 --------VYSFLKNSCPPVAEEFGNPKNLFWEPLRNHDIKWNFEKFLVGTDGVPVMRWY 185 V L+NSCPPVAEEFGNPKNLFWEPLRNHDIKWNFEKFLVG DGVPVMRWY Sbjct 233385 GGHTRH*PVAPTLQNSCPPVAEEFGNPKNLFWEPLRNHDIKWNFEKFLVGPDGVPVMRWY 233564 Query 186 HRANIATVKNDIIAYMRQQRGQ 207 HRANIATVKNDIIAYMRQQRGQ Sbjct 233565 HRANIATVKNDIIAYMRQQRGQ 233630 Score = 104 bits (259), Expect(2) = 1e-75, Method: Compositional matrix adjust. Identities = 54/68 (79%), Positives = 56/68 (82%), Gaps = 1/68 (1%) Frame = +2 Query 2 LGWMGLLPKE-QCAEVKCYDSVRGTIYDYGALTIDGDEYIPFRKYAGKMVLFVNVATYUG 60 GW+ P +VKCYDSVRGTIYDYGALTIDGDEYIPFRKYAGKMVLFVNVATY G Sbjct 232709 FGWLWDTPTPLPVPQVKCYDSVRGTIYDYGALTIDGDEYIPFRKYAGKMVLFVNVATY*G 232888 Query 61 LTLQYLEL 68 LTLQYL L Sbjct 232889 LTLQYLGL 232912 Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 35/44 (80%), Positives = 37/44 (84%), Gaps = 0/44 (0%) Frame = +2 Query 96 GQNSEILPALKYVRPGGGFVPNFQLFQKGDVNGAKEQKVYSFLK 139 G +L +YVRPGGGFVPNFQLFQKGDVNGAKEQKVYSFLK Sbjct 233198 GVGHPLLSPCRYVRPGGGFVPNFQLFQKGDVNGAKEQKVYSFLK 233329 >NOIK01000992.1 Anas zonorhyncha breed spot-billed scaffold994, whole genome shotgun sequence Length=107631 Score = 101 bits (252), Expect(2) = 7e-30, Method: Compositional matrix adjust. Identities = 53/115 (46%), Positives = 67/115 (58%), Gaps = 4/115 (3%) Frame = +1 Query 92 KQEPGQNSEILPALKYVRPGGGFVPNFQLFQKGDVNGAKEQKVYSFLKNSCPPVAEE--- 148 QE G N EIL LK+VRPGGGF PNF LFQK VNG V+++LK P +E Sbjct 45754 SQENGTNEEILNCLKHVRPGGGFEPNFTLFQKCQVNGQDTHPVFAYLKAHLPAPVDEPDH 45933 Query 149 -FGNPKNLFWEPLRNHDIKWNFEKFLVGTDGVPVMRWYHRANIATVKNDIIAYMR 202 P+ + W P+R DI WNFEKFLVG +G P R+ R A ++ DI ++ Sbjct 45934 LMTEPRFVVWSPVRRSDISWNFEKFLVGPEGEPFRRYSPRLPTAQLEPDIQRLLK 46098 Score = 51.2 bits (121), Expect(2) = 7e-30, Method: Compositional matrix adjust. Identities = 32/70 (46%), Positives = 43/70 (61%), Gaps = 3/70 (4%) Frame = +3 Query 25 TIYDYGALTIDGDEYIPFRKYAGKMVLFVNVATYUGLTLQ-YLELNALQNELGPYGLVVL 83 + YD A ++ G E + F + G++VL NVA+ G T++ Y +LN LQ P LVVL Sbjct 45465 SFYDLSATSLQG-EKVDFNVFRGRVVLIENVASL*GTTVRDYTQLNQLQARY-PRRLVVL 45638 Query 84 GFPSNQFGKQ 93 GFP NQFG Q Sbjct 45639 GFPCNQFGYQ 45668 >NOIK01000016.1 Anas zonorhyncha breed spot-billed scaffold16, whole genome shotgun sequence Length=6513609 Score = 96.3 bits (238), Expect(2) = 4e-29, Method: Compositional matrix adjust. Identities = 45/112 (40%), Positives = 67/112 (60%), Gaps = 4/112 (4%) Frame = +3 Query 90 FGKQEPGQNSEILPALKYVRPGGGFVPNFQLFQKGDVNGAKEQKVYSFLKNSCPPVAEE- 148 QE N EIL +L++VRPG G+ PNF +F+K +VNG +++FLK + P ++ Sbjct 5763633 LSPQENATNEEILRSLEHVRPGNGYKPNFPVFEKCEVNGKDAHPLFTFLKEALPFPHDDP 5763812 Query 149 ---FGNPKNLFWEPLRNHDIKWNFEKFLVGTDGVPVMRWYHRANIATVKNDI 197 NP+ + W P+R +DI WNFEKFL+ DGVP R+ +++DI Sbjct 5763813 SALMTNPQYIIWSPVRRNDISWNFEKFLIAPDGVPFKRYSRHFETIKIQDDI 5763968 Score = 54.3 bits (129), Expect(2) = 4e-29, Method: Compositional matrix adjust. Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 1/67 (1%) Frame = +1 Query 31 ALTIDGDEYIPFRKYAGKMVLFVNVATYUGLTLQ-YLELNALQNELGPYGLVVLGFPSNQ 89 A + E + GK++L VNVA+ G T + +L+LN LQ GP GL VLGFP NQ Sbjct 5763349 ARPLGAAEPLSLGSLRGKVLLVVNVASL*GTTTRDFLQLNELQRRFGPRGLQVLGFPCNQ 5763528 Query 90 FGKQEPG 96 FG Q G Sbjct 5763529 FGHQVLG 5763549 Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 45/112 (40%), Positives = 67/112 (60%), Gaps = 4/112 (4%) Frame = +3 Query 90 FGKQEPGQNSEILPALKYVRPGGGFVPNFQLFQKGDVNGAKEQKVYSFLKNSCPPVAEE- 148 QE N EIL +L++VRPG G+ PNF +F+K +VNG +++FLK + P ++ Sbjct 5765598 LSPQENATNEEILRSLEHVRPGNGYKPNFPVFEKCEVNGKDAHPLFTFLKEALPFPHDDP 5765777 Query 149 ---FGNPKNLFWEPLRNHDIKWNFEKFLVGTDGVPVMRWYHRANIATVKNDI 197 NP+ + W P+R +DI WNFEKFL+ DGVP R+ +++DI Sbjct 5765778 SALMTNPQYIIWSPVRRNDISWNFEKFLIAPDGVPFKRYSRHFETIKIQDDI 5765933 >NOIK01000001.1 Anas zonorhyncha breed spot-billed scaffold1, whole genome shotgun sequence Length=25320044 Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/95 (38%), Positives = 48/95 (51%), Gaps = 6/95 (6%) Frame = +1 Query 45 YAGKMVLFVNVATYUGLTLQ-YLELNALQNELGPYGLVVLGFPSNQFGKQEPGQNSEILP 103 Y K L VNVA+Y T + Y+ L L E GP VL FP NQFG+ EPG + EI Sbjct 15740425 YFFKATLVVNVASYCQNTDKNYIALQELHREFGPSHFTVLAFPCNQFGESEPGSSQEIEA 15740604 Query 104 ALKYVRPGGGFVPNFQLFQKGDVNGAKEQKVYSFL 138 K G + F +F K + G++ + + FL Sbjct 15740605 FAK-----GNYGVTFPVFHKIKILGSEAEPAFKFL 15740694 >NOIK01000398.1 Anas zonorhyncha breed spot-billed scaffold400, whole genome shotgun sequence Length=773721 Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/92 (41%), Positives = 48/92 (52%), Gaps = 6/92 (7%) Frame = +2 Query 48 KMVLFVNVATYUGLT-LQYLELNALQNELGPYGLVVLGFPSNQFGKQEPGQNSEILPALK 106 ++ L VNVA+ G T Y L LQ +LGPY VL FP NQFG+QEP N EI Sbjct 388499 QVSLVVNVASECGFTDSHYKALQQLQKDLGPYHFNVLAFPCNQFGQQEPDTNKEI---ES 388669 Query 107 YVRPGGGFVPNFQLFQKGDVNGAKEQKVYSFL 138 + R G F +F K V+GA + +L Sbjct 388670 FARKTYG--ATFPMFSKIAVSGAGAIPAFKYL 388759 >NOIK01000686.1 Anas zonorhyncha breed spot-billed scaffold688, whole genome shotgun sequence Length=293041 Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 24/51 (47%), Positives = 35/51 (69%), Gaps = 0/51 (0%) Frame = -1 Query 93 QEPGQNSEILPALKYVRPGGGFVPNFQLFQKGDVNGAKEQKVYSFLKNSCP 143 QE N EIL +L++VRPG G+ PNF +F+K +VNG +++FLK + P Sbjct 215311 QENATNEEILRSLEHVRPGNGYKPNFPVFEKCEVNGKDAHPLFTFLKEALP 215159 >NOIK01000121.1 Anas zonorhyncha breed spot-billed scaffold123, whole genome shotgun sequence Length=2428490 Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = -3 Query 61 LTLQYLELNALQNELGPYGLVVLGFPSNQF--GKQEPGQNSEILPALKYVRPGGGFVP 116 L+L Y+ L L + L+ LG P+ Q G EPG ILP L P G ++P Sbjct 440916 LSLAYMRLTCLHCPRSQHRLLSLGGPTRQKDPGLAEPGARGCILPDLALFLPAGTWLP 440743 Lambda K H a alpha 0.321 0.141 0.446 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 37803400515 Database: genome.fa Posted date: Oct 23, 2017 5:50 PM Number of letters in database: 1,310,797,575 Number of sequences in database: 20,089 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40