TBLASTN 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: genome.fa
           20,089 sequences; 1,310,797,575 total letters



Query= SPP00000003_1.0 # Protein # Iodothyronine deiodinase 3 (DI3) # Homo
sapiens # Complete

Length=278
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

NOIK01000233.1  Anas zonorhyncha breed spot-billed scaffold235, w...    322   2e-97
NOIK01000047.1  Anas zonorhyncha breed spot-billed scaffold48, wh...    145   1e-36
NOIK01000384.1  Anas zonorhyncha breed spot-billed scaffold386, w...  73.9    5e-13
NOIK01000133.1  Anas zonorhyncha breed spot-billed scaffold135, w...  33.5    6.6  
NOIK01000011.1  Anas zonorhyncha breed spot-billed scaffold11, wh...  33.1    7.8  


>NOIK01000233.1 Anas zonorhyncha breed spot-billed scaffold235, whole genome 
shotgun sequence
Length=1378994

 Score =   322 bits (825),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 159/258 (62%), Positives = 199/258 (77%), Gaps = 6/258 (2%)
 Frame = +2

Query  15       QTASCLVLFPRFLGTAFMLWLLDFLCIRKHFLGRRRRGQPEPEVELNSEGEEVPPDDPPI  74
                Q A+C++LFPRFL TA MLWLLDFLCIRK  L       P  E E+    E  PPDDPP+
Sbjct  1078223  QAAACILLFPRFLLTAVMLWLLDFLCIRKKMLL-----MPTAE-EVARASEGPPPDDPPV  1078384

Query  75       CVSDDNRLCTLASLKAVWHGQKLDFFKQAHEGGPAPNSEVVLPDGFQSQHILDYAQGNRP  134
                CVSD NR+ TL SLKAVWHGQKLDFFK AH G  APN EV+  DG +   ILD+A+G RP
Sbjct  1078385  CVSDSNRMFTLESLKAVWHGQKLDFFKSAHVGSLAPNPEVIQLDGQKRLRILDFARGKRP  1078564

Query  135      LVLNFGSCTUPPFMARMSAFQRLVTKYQRDVDFLIIYIEEAHPSDGWVTTDSPYIIPQHR  194
                L+LNFGSCT PPFMAR+ +FQRLV  +    DFL++YIEEAHPSDGWV++D+ Y IP+H+
Sbjct  1078565  LILNFGSCT*PPFMARLRSFQRLVAHFVDIADFLLVYIEEAHPSDGWVSSDAAYNIPKHQ  1078744

Query  195      SLEDRVSAARVLQQGAPGCALVLDTMANSSSSAYGAYFERLYVIQSGTIMYQGGRGPDGY  254
                 L+DR+ AA+++++GAP C L +DTM N+SS+AYGAYFERLY+IQ   +MYQGGRGP+GY
Sbjct  1078745  CLQDRLRAAQLMREGAPDCPLAVDTMDNASSAAYGAYFERLYIIQEEKVMYQGGRGPEGY  1078924

Query  255      QVSELRTWLERYDEQLHG  272
                ++SELR+WL++Y  +L  
Sbjct  1078925  KISELRSWLDQYKTRLQS  1078978


>NOIK01000047.1 Anas zonorhyncha breed spot-billed scaffold48, whole genome shotgun 
sequence
Length=4459198

 Score =   145 bits (367),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 80/189 (42%), Positives = 111/189 (59%), Gaps = 22/189 (12%)
 Frame = -1

Query  99       FFKQAHEGGPAPNSEVVL----PDGFQSQ------------HILDYAQGNRPLVLNFGSC  142
                F  Q   GG APNS V+      DG  S             H+LD+A   RPLV+NFGS 
Sbjct  2693221  FCCQVKLGGEAPNSSVIHIAKGSDGSSSSWKNVGGKCGTKCHLLDFADSERPLVVNFGSA  2693042

Query  143      TUPPFMARMSAFQRLVTKYQRDVDFLIIYIEEAHPSDGWVT---TDSPYIIPQHRSLEDR  199
                T PPF +++SAF +LV ++    DFL++YI+EAHPSDGW     + S + + +HR+ EDR
Sbjct  2693041  T*PPFTSQLSAFSKLVEEFSGVADFLLVYIDEAHPSDGWAAPGISPSSFEVKKHRNQEDR  2692862

Query  200      VSAARVLQQG---APGCALVLDTMANSSSSAYGAYFERLYVIQSGTIMYQGGRGPDGYQV  256
                 +AA  L +     P C +V D M N+++ AYG  FER+ ++Q   I Y GG+GP  Y +
Sbjct  2692861  CAAAHQLLERFSLPPQCQVVADCMDNNANVAYGVSFERVCIVQRQKIAYLGGKGPFFYNL  2692682

Query  257      SELRTWLER  265
                 E+R WLE+
Sbjct  2692681  QEVRLWLEQ  2692655


>NOIK01000384.1 Anas zonorhyncha breed spot-billed scaffold386, whole genome 
shotgun sequence
Length=791277

 Score = 73.9 bits (180),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = +1

Query  179     DGWVTTDSPYIIPQHRSLEDRVSAARVLQQGAPGCALVLDTMANSSSSAYGAYFERLYVI  238
               DGW   ++  +I  HRSLEDR  AA++LQ+  P C +VLDTM N SSS Y A  ERLY++
Sbjct  460204  DGWAFKNN-IVINNHRSLEDRKIAAQLLQKNNPLCPVVLDTMENLSSSKYAALPERLYLL  460380

Query  239     QSGTIMYQ  246
               Q G ++Y+
Sbjct  460381  QQGKVIYK  460404


 Score = 67.4 bits (163),  Expect = 7e-11, Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 38/57 (67%), Gaps = 1/57 (2%)
 Frame = +3

Query  128     YAQGNRPLVLNFGSCTUPPFMARMSAFQRLVTKYQRDVDFLIIYIEEAHPSDGWVTT  184
               +  GNRPL+LNFGSCT P FM +   F +LV  +    DFLIIYIEEAH + G V T
Sbjct  458835  FLLGNRPLILNFGSCT*PSFMLKFDEFNKLVKDFSSIADFLIIYIEEAHAA-GTVQT  459002


>NOIK01000133.1 Anas zonorhyncha breed spot-billed scaffold135, whole genome 
shotgun sequence
Length=2216485

 Score = 33.5 bits (75),  Expect = 6.6, Method: Compositional matrix adjust.
 Identities = 13/34 (38%), Positives = 20/34 (59%), Gaps = 0/34 (0%)
 Frame = +2

Query  14      AQTASCLVLFPRFLGTAFMLWLLDFLCIRKHFLG  47
                +T  CL+L P  L + ++LWLL + C+    LG
Sbjct  817538  GKTQHCLLLCPNMLCSGYVLWLLGWWCVLAQALG  817639


>NOIK01000011.1 Anas zonorhyncha breed spot-billed scaffold11, whole genome shotgun 
sequence
Length=7021308

 Score = 33.1 bits (74),  Expect = 7.8, Method: Compositional matrix adjust.
 Identities = 17/40 (43%), Positives = 23/40 (58%), Gaps = 0/40 (0%)
 Frame = -3

Query  119     GFQSQHILDYAQGNRPLVLNFGSCTUPPFMARMSAFQRLV  158
               GF  +   D  QG+  L + FGS + PPF+A MS+F  L 
Sbjct  227977  GFYPKMRADALQGSGDLTVPFGSWSEPPFVA*MSSFDSLA  227858



Lambda      K        H        a         alpha
   0.322    0.139    0.438    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 66903989306


  Database: genome.fa
    Posted date:  Oct 23, 2017  5:50 PM
  Number of letters in database: 1,310,797,575
  Number of sequences in database:  20,089



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40