TBLASTN 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: genome.fa 20,089 sequences; 1,310,797,575 total letters Query= SPP00001031_2.0 # Protein # Iodothyronine deiodinase 2 (DIO2) # Chicken Length=264 Score E Sequences producing significant alignments: (Bits) Value NOIK01000047.1 Anas zonorhyncha breed spot-billed scaffold48, wh... 388 1e-120 NOIK01000233.1 Anas zonorhyncha breed spot-billed scaffold235, w... 176 3e-47 NOIK01000384.1 Anas zonorhyncha breed spot-billed scaffold386, w... 59.7 2e-08 NOIK01000008.1 Anas zonorhyncha breed spot-billed scaffold8, who... 33.5 5.7 NOIK01000354.1 Anas zonorhyncha breed spot-billed scaffold356, w... 32.7 9.5 >NOIK01000047.1 Anas zonorhyncha breed spot-billed scaffold48, whole genome shotgun sequence Length=4459198 Score = 388 bits (997), Expect = 1e-120, Method: Compositional matrix adjust. Identities = 186/191 (97%), Positives = 190/191 (99%), Gaps = 0/191 (0%) Frame = -1 Query 74 QVKLGGEAPNSSVIHIAKGNDGSNSSWKSVGGKCGTKCHLLDFANSERPLVVNFGSATUP 133 QVKLGGEAPNSSVIHIAKG+DGS+SSWK+VGGKCGTKCHLLDFA+SERPLVVNFGSAT P Sbjct 2693212 QVKLGGEAPNSSVIHIAKGSDGSSSSWKNVGGKCGTKCHLLDFADSERPLVVNFGSAT*P 2693033 Query 134 PFTSQLSAFSKLVEEFSGVADFLLVYIDEAHPSDGWAAPGISPSSFEVKKHRNQEDRCAA 193 PFTSQLSAFSKLVEEFSGVADFLLVYIDEAHPSDGWAAPGISPSSFEVKKHRNQEDRCAA Sbjct 2693032 PFTSQLSAFSKLVEEFSGVADFLLVYIDEAHPSDGWAAPGISPSSFEVKKHRNQEDRCAA 2692853 Query 194 AHQLLERFSLPPQCQVVADCMDNNANVAYGVSFERVCIVQRQKIAYLGGKGPFFYNLQEV 253 AHQLLERFSLPPQCQVVADCMDNNANVAYGVSFERVCIVQRQKIAYLGGKGPFFYNLQEV Sbjct 2692852 AHQLLERFSLPPQCQVVADCMDNNANVAYGVSFERVCIVQRQKIAYLGGKGPFFYNLQEV 2692673 Query 254 RLWLEQNFSKR 264 RLWLEQNFSKR Sbjct 2692672 RLWLEQNFSKR 2692640 Score = 154 bits (388), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 77/88 (88%), Positives = 80/88 (91%), Gaps = 3/88 (3%) Frame = -3 Query 1 MGLLSVDLLITLQILPVFFSNCLFLALYDSVILLKHMVLFLSRSKSARGEWRRMLTSEGL 60 MGLLSVDLLITLQILPVFFSNCLFLALYDSVILLKHMVLFLSRSK+ARGEWRRMLTSEGL Sbjct 2704583 MGLLSVDLLITLQILPVFFSNCLFLALYDSVILLKHMVLFLSRSKAARGEWRRMLTSEGL 2704404 Query 61 RCVWNSFLLDAYKQVKLG---GEAPNSS 85 RCVWNSFLLDAYKQV G G P ++ Sbjct 2704403 RCVWNSFLLDAYKQVGAGHRHGPGPGTA 2704320 >NOIK01000233.1 Anas zonorhyncha breed spot-billed scaffold235, whole genome shotgun sequence Length=1378994 Score = 176 bits (446), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 98/260 (38%), Positives = 141/260 (54%), Gaps = 36/260 (14%) Frame = +2 Query 14 ILPVFFSNCLFLALYDSVILLKHMVLFLSRSKSARG--------------EWRRMLTSEG 59 + P F + L L D + + K M+L + + AR + RM T E Sbjct 1078244 LFPRFLLTAVMLWLLDFLCIRKKMLLMPTAEEVARASEGPPPDDPPVCVSDSNRMFTLES 1078423 Query 60 LRCVWNSFLLDAYKQVKLGGEAPNSSVIHIAKGNDGSNSSWKSVGGKCGTKCHLLDFANS 119 L+ VW+ LD +K +G APN VI + DG + +LDFA Sbjct 1078424 LKAVWHGQKLDFFKSAHVGSLAPNPEVIQL----DGQK------------RLRILDFARG 1078555 Query 120 ERPLVVNFGSATUPPFTSQLSAFSKLVEEFSGVADFLLVYIDEAHPSDGWAAPGISPSSF 179 +RPL++NFGS T PPF ++L +F +LV F +ADFLLVYI+EAHPSDGW + S +++ Sbjct 1078556 KRPLILNFGSCT*PPFMARLRSFQRLVAHFVDIADFLLVYIEEAHPSDGWVS---SDAAY 1078726 Query 180 EVKKHRNQEDRCAAAHQLLERFSLPPQCQVVADCMDNNANVAYGVSFERVCIVQRQKIAY 239 + KH+ +DR AA + E P C + D MDN ++ AYG FER+ I+Q +K+ Y Sbjct 1078727 NIPKHQCLQDRLRAAQLMREG---APDCPLAVDTMDNASSAAYGAYFERLYIIQEEKVMY 1078897 Query 240 LGGKGPFFYNLQEVRLWLEQ 259 GG+GP Y + E+R WL+Q Sbjct 1078898 QGGRGPEGYKISELRSWLDQ 1078957 >NOIK01000384.1 Anas zonorhyncha breed spot-billed scaffold386, whole genome shotgun sequence Length=791277 Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 25/44 (57%), Positives = 35/44 (80%), Gaps = 0/44 (0%) Frame = +3 Query 121 RPLVVNFGSATUPPFTSQLSAFSKLVEEFSGVADFLLVYIDEAH 164 RPL++NFGS T P F + F+KLV++FS +ADFL++YI+EAH Sbjct 458850 RPLILNFGSCT*PSFMLKFDEFNKLVKDFSSIADFLIIYIEEAH 458981 Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust. Identities = 27/73 (37%), Positives = 42/73 (58%), Gaps = 7/73 (10%) Frame = +1 Query 167 DGWAAPGISPSSFEVKKHRNQEDRCAAAHQLLERFSLPPQCQVVADCMDNNANVAYGVSF 226 DGWA ++ + HR+ EDR AA QLL++ + P C VV D M+N ++ Y Sbjct 460204 DGWAFK----NNIVINNHRSLEDRKIAA-QLLQKNN--PLCPVVLDTMENLSSSKYAALP 460362 Query 227 ERVCIVQRQKIAY 239 ER+ ++Q+ K+ Y Sbjct 460363 ERLYLLQQGKVIY 460401 >NOIK01000008.1 Anas zonorhyncha breed spot-billed scaffold8, whole genome shotgun sequence Length=7925970 Score = 33.5 bits (75), Expect = 5.7, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 2/36 (6%) Frame = -3 Query 11 TLQILPVFFSNCLFLALYDSVILLKHMVLFLSRSKS 46 T +ILPVF+ C FL V LL + LF RSKS Sbjct 7810654 TAEILPVFY--CRFLCFLYPVALLSGLFLFAKRSKS 7810553 >NOIK01000354.1 Anas zonorhyncha breed spot-billed scaffold356, whole genome shotgun sequence Length=864304 Score = 32.7 bits (73), Expect = 9.5, Method: Compositional matrix adjust. Identities = 27/88 (31%), Positives = 44/88 (50%), Gaps = 14/88 (16%) Frame = -2 Query 2 GLLSVDLLITLQILPVFFSNCLFLALYDSVILLKHMVLFLSR--------SKSARGEWRR 53 G LS+ +L+ +LP S+C L+ V KH+++ +S+ ++A+ W Sbjct 634101 G*LSMSVLV---LLPAIISDCC*LS---EVGCAKHLLISISKQLGRRPNHKRAAKQSWPC 633940 Query 54 MLTSEGLRCVWNSFLLDAYKQVKLGGEA 81 L GLR +FLL V++GGEA Sbjct 633939 CLLCGGLR*AMPAFLLLILGGVRMGGEA 633856 Lambda K H a alpha 0.322 0.136 0.422 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 61259082498 Database: genome.fa Posted date: Oct 23, 2017 5:50 PM Number of letters in database: 1,310,797,575 Number of sequences in database: 20,089 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40