------- SECIS element -- id:1 -- grade:A ---- Chromosome = your_sequence Strand = - Positions = 45559 - 45485 Found by: Infernal (score=25.43) Covels (score=25.61) Stem2 length = 10 Apical loop length = 18 Insertion in stem2 = 0, 0 Free Energy = -23.67 ..(((((((.......(((((((((((((((................)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc (((({(((((--....{[[{((((((((((..................))))))))))}]]}..--...)))))})))) target UGCUUGUGUG--UUUAUGAAGAGCGCUAACAAAAGAGUAAUUAACUCAGUUGGUGUUCAGAUGC--CCUCACACUGGCA **** ^^^ ****