_________________________________.______________________._________________________________________________________________________________
_|*|_|*|_|*|_|*|_|*|_|*|_|*|_|*| |       knownSP        |  secis_index:1     SeB_exonerate category:ALI_U |*|_|*|_|*|_|*|_|*|_|*|_|*|_|*|_
_________________________________|______________________|_________________________________________________________________________________

Blastx evalue: e-177
Query name: gi|874477096|ref|XP_005031863.2| PREDICTED: type III iodothyronine deiodinase [Anas platyrhynchos]
Query range: 1-274  (total 274)

Target: /data/www-rg/seblastian_results/276567477/tempfiles/temptarget.fasta
Chromosome: your_sequence Strand: +
Positions:
-Exon 1  49958        50779

Redox box: no

Query   MLHSLGVHTLQLLTQAAACILLFPRFLLTAVMLWLLDFLCIRKKMLLMPTAEEVARASEGPPPDDPPVCVSDSNRMFTLESLKAVWHGQKLDFFKSAHVG
       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Target  MLHSLGVHTLQLLTQAAACILLFPRFLLTAVMLWLLDFLCIRKKMLLMPTAEEVARASEGPPPDDPPVCVSDSNRMFTLESLKAVWHGQKLDFFKSAHVG
       acctcggcatcccacgggtacctcctccaggactccgtctaaaaaccacagggggagaggcccggccgtgtgtacatacgtcaggtcgcacgttatgcgg
       ttactgtactattcacccgttttcgtttcctttgttattgtgaattttcccaatcgcgagcccaacctgtcacagttctactactgagaatattaccatg
       gccccctccgggccggccccccccccgcccggcgcgttgctgggggggcgggggcaccgggcccccaccgcccccgcgggggacggcggggcccgggcgc
                                                                                                           

Query   SLAPNPEVIQLDGQKRLRILDFARGKRPLILNFGSCTUPPFMARLRSFQRLVAHFVDIADFLLVYIEEAHPSDGWVSSDAAYNIPKHQCLQDRLRAAQLM
       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Target  SLAPNPEVIQLDGQKRLRILDFARGKRPLILNFGSCTUPPFMARLRSFQRLVAHFVDIADFLLVYIEEAHPSDGWVSSDAAYNIPKHQCLQDRLRAAQLM
       ttgcacggaccggcaaccacgtgcgaaccacatgatatcctagcccttcccggctggaggtccgtagggcctggtgatgggtaacacctccgaccggcca
       ctccacattatagaagtgttatcggagctttatgggcgccttcgtgctagttcattatcattttataacaccaggtgcaccaatcaaagtaagtgccatt
       cgccccggcggcgggacccgcccccgaccccccccccacgcgcccgccgcgcgccgctcccgggccaaacccccgccgcacccccacgccgcgggatggg
                                            *                                                              

Query   REGAPDCPLAVDTMDNASSAAYGAYFERLYIIQEEKVMYQGGRGPEGYKISELRSWLDQYKTRLQSPSTVVIQV
       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Target  REGAPDCPLAVDTMDNASSAAYGAYFERLYIIQEEKVMYQGGRGPEGYKISELRSWLDQYKTRLQSPSTVVIQV
       agggcgtccgggaagagtaggtggttgactaacggagatcggagcggtaatgcaatcgctaacccacaaggacg
       gagccagctctactaaccgccagcatagtattaaaattaaggggcagaatcatgggtaaaacgtagcgctttat
       gaggctccgcgccgcttccccctcccggccccggggggcgacaaagccgcgggacgacacacgcgcccggccag
                                                                                 
Sequence until next stop: 
TAA
* 

Distance CDS-SECIS: 403 ; UGA-SECIS: 811