_________________________________.______________________._________________________________________________________________________________
_|*|_|*|_|*|_|*|_|*|_|*|_|*|_|*| |       knownSP        |  secis_index:1     SeB_exonerate category:ALI_U |*|_|*|_|*|_|*|_|*|_|*|_|*|_|*|_
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 Blastx evalue: 2e-36
 Query name: gi|874477273|ref|XP_005020858.2| PREDICTED: type I iodothyronine deiodinase [Anas platyrhynchos]
 Query range: 1-246  (total 246)

 Target: /data/www-rg/seblastian_results/820557599/tempfiles/temptarget.fasta
 Chromosome: your_sequence Strand: +
 Positions:
 -Exon 1  46828        47158
 -Exon 2  48641        48784
 -Exon 3  50001        50200
 -Exon 4  50680        50742

 Redox box: no

Query   MWSVRLLLQKALVLLHVTASVVVGKTLMVLFPNTMKRHILKQGEKSRMNQNPKFSYENWGPTFFSFQYLLFVLKVKWKRLEDEAYEGRPAPNTPVVTSQG
        ||| ||||||||||||||||||/|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Target  MWSARLLLQKALVLLHVTASVVIGKTLMVLFPNTMKRHILKQGEKSRMNQNPKFSYENWGPTFFSFQYLLFVLKVKWKRLEDEAYEGWPAPNTPVVTSQG
        atagaccccagcgcccgagaggagaacagctcaaaaacacacggaaaaacacatatgatgcattatcttctgcagataacggggtggtcgcaacggatcg
        tggcgtttaacttttatccgtttgactttttcactagattaagaaggtaaacatgaaaggccttgtaatttttatagagtaaacaaggcccaccttccag
        ggccgggagaccttgcccgctcccagggggccccgagccaaacggcagcgccgcccgcgcacccccgtaccggggggggggcaccgagttccaaggacgg
                                                                                                            

Query   DIRHLFDFMRG <---Intron---> NRPLILNFGSCTUPSFMLKFDEFNKLVKDFSSIADFLIIYIEEAHAAD <---Intron---> GWAFKNNII
        ||||||||||| <   1482bp   > |||||||||||||||||||||||||||||||||||||||||||||||| <   1216bp   > ||||||||/
Target  DIRHLFDFMRG                NRPLILNFGSCTUPSFMLKFDEFNKLVKDFSSIADFLIIYIEEAHAAD                GWAFKNNIV
        gaccctgtacg                acctacatgatatcttatatggtaacgagtataggtcaatagggcggg                gtgtaaaag
        atgattattg                gagctttatgggcgcctttataataattaatgctcattttataacacc                aggctaaatt
        ccgcccccga                tcgtacgttatccatatgaattgccgccatccgaatctccccaatcaa                cagttactct
                                               *                                                            

Query   INNHRSLEDRKIAAQLLQKNNPLCPVVLDTMENLSSSKYAALPERLYLLQEGKVIYK <---Intron---> GGVGPWNYHPQEIRAILEKLK
        ||||||||||||||||||||||||||||||||||||||||||||||||||/|||||| <   479bp    > |||||||||||||||||||||
Target  INNHRSLEDRKIAAQLLQKNNPLCPVVLDTMENLSSSKYAALPERLYLLQQGKVIYK                GGVGPWNYHPQEIRAILEKLK
        aaacaacggcaaggccccaaacttcggtgaagacaatatggccgactccccgagata                ggggctatcccgacgacgaca
        taaaggtaagatccattaaaactgctttactaatggcaacctcagtattaagattaa                ggtgcgaaacaatgcttaata
        tctcactataataaattgatttatagtactgaccctaattggaaagtgtagggtccg                aaggtgctccgaacccgaaga
                                                                                                      
 Sequence until next stop: 
TAG
 * 

 Distance CDS-SECIS: 490 ; UGA-SECIS: 856