------- SECIS element -- id:1 -- grade:A ---- Chromosome = NW_018330451.1:subseq_498805,10263_ Strand = - Positions = 1117 - 1046 Found by: Infernal (score=28.33) Covels (score=28.55) Stem2 length = 10 Apical loop length = 14 Insertion in stem2 = 0, 0 Free Energy = -11.34 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ...({((((.--....{[[{((((((((({(.....-.........)})))))))))}]]}..--..-.))))})... target UCUACUUGCA--UUAAUGAGAACAGAAACGUAAACU-AUAACCUAGGGGUUUCUGUUGGAUAG--UU-GGCAACUUAG **** ^^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = NW_018330451.1:subseq_498805,10263_ Strand = - Positions = 668 - 603 Found by: Infernal (score=28.26) Covels (score=13.38) Stem2 length = 9 Apical loop length = 10 Insertion in stem2 = 1, 0 Free Energy = -9.9 ..(((((((.......((((((((((.(((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccug-gcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ...((((((---....([[{(((({(.((((......--.-----...)))))}))))}]])..--..-.))))))... target UUUCCAUAG---UCAAUGAUGGUUCAAUAGGCAAACC--A-----GGUCCUAUAAACCUGAAUU--UU-UUUAUGGUUA **** ^^^ ****