------- SECIS element -- id:1 -- grade:A ---- Chromosome = NW_018339842.1:subseq_1983894,97923_ Strand = - Positions = 29421 - 29344 Found by: Infernal (score=30.63) Covels (score=24.29) Stem2 length = 10 Apical loop length = 15 Insertion in stem2 = 0, 1 Free Energy = -14.46 ..(((((((.......(((((((((((((((...............))))))))).)))))).........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccagg-cCuGAUGuuu-uuucaugaccggc (((((((((((.....{[[(({(((((((((...............))))))))).}))]]}.....-)-)))))))))) target UAAAGAUUUGCAUUAAUGAAGACUACACAGAAAACCUCCCUGAGGAUUUGUGUGGACCUGAUAUUUA-G-CAAAUUUUUG **** ^^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = NW_018339842.1:subseq_1983894,97923_ Strand = + Positions = 76822 - 76891 Found by: Infernal (score=21.52) Covels (score=10.05) Stem2 length = 9 Apical loop length = 17 Insertion in stem2 = 0, 0 Free Energy = -11.73 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ....((([(---....{[[[(((((((((.......--..........)))))))))]]]}..--..-.)]))).... target GCCCCAGAA---UGAAUGAAGCAGCUGGGCCAAAGC--AGAUGCGACACUCAGUUGUGGAUGU--GU-CUGCUGAUGA **** ^^^ ****