------- SECIS element -- id:1 -- grade:A ---- Chromosome = KV389887.1:subseq_389251,100209_ Strand = + Positions = 69530 - 69600 Found by: Infernal (score=38.05) Covels (score=31.66) Stem2 length = 9 Apical loop length = 17 Insertion in stem2 = 0, 0 Free Energy = -23.63 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc .((((((((---....([[{((({((((((.................))))))})))}]])----....)))))))). target UGGUGCCAG---AUGAUGACGAUCUGGGUGGAAACCCAUCCUGUGGGCACCCACAUCCGAG----CCCGCUGGCAUUU **** ^^^ **** ------- SECIS element -- id:2 -- grade:C ---- Chromosome = KV389887.1:subseq_389251,100209_ Strand = + Positions = 15466 - 15540 Found by: Infernal (score=16.69) Covels (score=12.43) Stem2 length = 8 Apical loop length = 15 Insertion in stem2 = 0, 0 Free Energy = -23.16 ..(((((((........(((((((((((((((.................))))))))))))))).........))))))).. model uucggucaugcg-UuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc ...(([(((((......{[[{{((((((((.------..............))))))))}}]]}.....-.)))))]))... target CAGUGACCAGCUCCAGAUGAUAGGCUCAGCC------UUCUCAUGACACAUGCUGAGCUCUGAUGCUGG-UGCUGGGCAGGC **** ****