------- SECIS element -- id:1 -- grade:A ----
 Chromosome = KV389451.1:subseq_773759,100131_ Strand = + Positions = 54589 - 54663
 Found by:  Infernal (score=31.35) Covels (score=38.65)
 Stem2 length = 12   Apical loop length = 13   Insertion in stem2 = 0, 0
 Free Energy = -17.72

         ..(((((((.......(((((((((((((((...............))))))))))))))).........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc
         ..([((([(---(...{[[{((((((((((((.............))))))))))))}]]}.....-..))])))])..
 target  GUGACUGAC---AUUAUGAAGGUCUGUACUGAAGACAGCAAGCUGUUAGUACAGACUAGAUGCUUU-CUUGGCAGGCUC
                         ****                                     ****                  

------- SECIS element -- id:2 -- grade:C ----
 Chromosome = KV389451.1:subseq_773759,100131_ Strand = + Positions = 76791 - 76863
 Found by:  Infernal (score=10.74) Covels (score=7.75)
 Stem2 length = 8   Apical loop length = 9   Insertion in stem2 = 0, 0
 Free Energy = -6.14

         ..(((((((.......(((((((((((((((...............)))))))))))))))............)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu---u-uuucaugaccggc
         ...(((((((--....{[[{({{({(((([(.....-..-----..)]))))})}})}]]}........-..)))))))...
 target  CAGUGCCUGG--CAUAUGAUGAAUUUGUAGUGAAUG-AA-----UGAAUGUAUACACUGAUGCCUUCUC-UACCAGGCAAAC
                         ****            ^^                       ****                     

------- SECIS element -- id:3 -- grade:B ----
 Chromosome = KV389451.1:subseq_773759,100131_ Strand = - Positions = 43418 - 43334
 Found by:  Infernal (score=10.47) Covels (score=1.88)
 Stem2 length = 9   Apical loop length = 14   Insertion in stem2 = 2, 0
 Free Energy = -7.34

         ..(((((((.............((((((((((.((.(((...............)))))))))))))))...........)))))))..
 model   uucggucaugcg------UuaAUGAcGgccug-gc-ccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu--u-uuucaugaccggc
         ...(((((((............{[[{((((({.(-.(((.....-.........)))-)})))))}]]}.......-..)))))))...
 target  CCAAGGCUGGAGUACAAUGGCAUGAUCUCAGCUC-ACUGCAACU-UCUGCCUCCUAG-GUUUGAGUGAUUUUCCUG-CCUCAGCCUCCC
                               ****              ^^                       ****