------- SECIS element -- id:1 -- grade:A ---- Chromosome = KV389679.1:subseq_2553092,100146_ Strand = - Positions = 48825 - 48758 Found by: Infernal (score=27.8) Covels (score=26.97) Stem2 length = 10 Apical loop length = 9 Insertion in stem2 = 0, 0 Free Energy = -11.92 ..(((((((.......(((((((((((((((...............)))))))))))))))..........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc ...(((({(---....([[{(([(((((((......--------...)))))))]))}]])......-...)}))))... target GUUGGAACA---UUAAUGAUGGAACAUGGCCAAACU--------UCAGUCAUGUGCCUGAAGCCAUG-GUUUCUUCCCCG **** ^^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = KV389679.1:subseq_2553092,100146_ Strand = + Positions = 13935 - 14011 Found by: Infernal (score=18.53) Covels (score=11.36) Stem2 length = 9 Apical loop length = 19 Insertion in stem2 = 1, 0 Free Energy = -21.63 ..(((((((.......((((((((((.(((((.................)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccug-gcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc .(((((((..--....{[[((({(((.((((...................)))))))})))]]}..--.....))))))). target CUGGGGGCAG--GGCAUGAUGUCUCAUGCCUGCAAUCCCAGCAUUUUGGGAGGCUGAAGCAGACUG--CUUGAGCUCCCAA **** ^^ ****