------- SECIS element -- id:1 -- grade:C ---- Chromosome = KV389640.1:subseq_3351213,100275_ Strand = - Positions = 35343 - 35273 Found by: Infernal (score=15.58) Covels (score=9.28) Stem2 length = 7 Apical loop length = 10 Insertion in stem2 = 0, 0 Free Energy = -7.32 ..(((((((..........(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcg---UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ..([((((((.........([[((({({((({(.........-------.)})))})})))]])..--..-))))))]).. target UACAUAUUUCUUGUGUGAAUGAAGAAAUCUGUCCACUCACAC-------UGUCAGUUCUCUGAGGA--AU-GAGAUAGGGU **** **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = KV389640.1:subseq_3351213,100275_ Strand = - Positions = 82500 - 82431 Found by: Infernal (score=10.98) Stem2 length = 9 Apical loop length = 13 Insertion in stem2 = 2, 0 Free Energy = -9.52 ..(((((((.......((((((((((.((.(((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccug-gc-ccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ...((((((.--....{[[{((((({.(-.(((.....--........)))-)})))))}]]}----....))))))... target GGAGGGCAGU--GGUAUGACCUUGGCUC-ACUGCAACC--UCACCUCCCAG-GUUCAAGUGAU----UCUCCUGCCUCAG **** ^^ ****