------- SECIS element -- id:1 -- grade:A ---- Chromosome = KV389500.1:subseq_688484,100443_ Strand = + Positions = 50665 - 50728 Found by: Infernal (score=28.07) Covels (score=20.11) Stem2 length = 9 Apical loop length = 10 Insertion in stem2 = 0, 0 Free Energy = -19.3 ..(((((((.......(((((((((((((((...............)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc ..(((((((---(...([[{(((((({(((-.....-..-----...)))}))))))}]])----...)))))))).. target GGCCUUCAC---AGAAUGAUGGUACCUCCU-AAACC-UU-----CAAGGGUGGUGUCUGAG----AGGUGUGAAGGGC **** ^^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = KV389500.1:subseq_688484,100443_ Strand = - Positions = 39213 - 39142 Found by: Infernal (score=14.16) Covels (score=6.5) Stem2 length = 9 Apical loop length = 18 Insertion in stem2 = 0, 0 Free Energy = -10.87 ..(((((((.......(((((((((((((((................)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc .((((({((---....{[[((({(((((((..................)))))))})))]]}----....))}))))). target GUUCCAAUU---CUCAUGAAUCCUUAAGCUCUCUCGGAAUCAAAGAGUGGUUUAAAGAUGAU----CGUAAAAUGGAAA **** ****