------- SECIS element -- id:1 -- grade:A ---- Chromosome = KV389771.1:subseq_1034201,100581_ Strand = - Positions = 45268 - 45196 Found by: Infernal (score=23.38) Covels (score=31.18) Stem2 length = 10 Apical loop length = 18 Insertion in stem2 = 0, 0 Free Energy = -20.67 ..(((((((.......(((((((((((((((................)))))))))))))))........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc (({((((((---....{[[(((((((((((..................)))))))))))]]}..--..-.))))))})) target ACCAGUGUG---CGGAUGAUAACUACUGACGAAAGAGUUGUCGACUCAGUCAGUGGUUGGAUGU--AG-UCACAUUAGU **** ^^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = KV389771.1:subseq_1034201,100581_ Strand = + Positions = 22243 - 22326 Found by: Infernal (score=10.68) Covels (score=0.13) Stem2 length = 11 Apical loop length = 12 Insertion in stem2 = 1, 0 Free Energy = -18.4 ..(((((((...............((((((((((((.(((...............)))))))))))))))........))))))).. model uucggucaugcg--------UuaAUGAcGgccuggc-ccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc .(({(((((...............{[[{((((({((.(((((...-.......)))))))})))))}]]}..--....)))))})). target UGCCUAGGCUGGAGUACAAUGGCAUGAUCUUGGCUCACGGCAACC-UCCCGCCUGCUGGGUUCAAGUGAUUA--UUCUGCCUAAGCC **** ^^ ****