genewise output
Score 136.66 bits over entire alignment
Scores as bits over a synchronous coding model
Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info
SPP00000355_2.0 1 MVYLLNGQVLDSWSPSPWRLSWVTGFFWGIAEFVLLL-KTLLQQDVKKR
MVY+ NGQVLDS + SPWRLS +T FFWGIAEFV+L KTLLQQDVKKR
MVYISNGQVLDSRNQSPWRLSLITDFFWGIAEFVVLFFKTLLQQDVKKR
KV390038.1:subs50000 agtatagcgtgacactctatttaagtttgaggtggtttaaccccggaaa
ttatcagattaggaaccggtcttcattggtcattttttacttaaataag
gtccgcagggccgtgtagaatgaatccgaatgtgtatcacgtgatgaaa
SPP00000355_2.0 49 SSYGNSSDSRYDDERGPP------MGRINHLHGPSPPLMAGG
SYGNSSDSRYDD RGPP MGRINHL GPSPP MAGG
RSYGNSSDSRYDDGRGPPGNPPXRMGRINHLRGPSPPPMAGG
KV390038.1:subs50147 aatgattgtatgggagccgacctaagaaacccgcacccaggg
ggagaccacgaaagggccgaccggtggtaatggcgccctcgg
actacattcatttaagaaactcaagtacttgtcctttagtta
//
>KV390038.1:subseq(874322,100272).pep
MVYISNGQVLDSRNQSPWRLSLITDFFWGIAEFVVLFFKTLLQQDVKKRRSYGNSSDSRY
DDGRGPPGNPPXRMGRINHLRGPSPPPMAGG
//
>KV390038.1:subseq(874322,100272).[50000:50272].sp
ATGGTTTACATCTCGAACGGACAGGTGTTGGACAGCCGGAATCAGTCTCCATGGAGATTA
TCTTTGATAACAGATTTCTTCTGGGGAATAGCTGAGTTTGTGGTTTTATTTTTCAAAACC
CTGCTTCAGCAAGATGTGAAAAAAAGAAGAAGCTATGGAAACTCATCTGATTCCAGATAT
GATGATGGAAGAGGGCCACCAGGAAACCCTCCCTGAAGAATGGGTAGAATCAATCATCTG
CGTGGCCCCAGTCCTCCTCCAATGGCTGGTGGA
//
KV390038.1:subseq(874322,100272) GeneWise match 50000 50272 162.50 + . KV390038.1:subseq(874322,100272)-genewise-prediction-1
KV390038.1:subseq(874322,100272) GeneWise cds 50000 50272 0.00 + 0 KV390038.1:subseq(874322,100272)-genewise-prediction-1
//
genewise output
Score 20.90 bits over entire alignment
Scores as bits over a synchronous coding model
Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info
SPP00000355_2.0 12 SWSPSPWRLSWVT
S P WRL+W T
SLEPGSWRLAWAT
KV390038.1:sub-19127 tcgcgatatgtga
ctacggggtcgcc
atgtatgaacgaa
//
>KV390038.1:subseq(874322,100272).pep
SLEPGSWRLAWAT
//
>KV390038.1:subseq(874322,100272).[19127:19087].sp
TCACTTGAGCCTGGAAGTTGGAGATTAGCCTGGGCAACA
//
KV390038.1:subseq(874322,100272) GeneWise match 19127 19089 20.90 - . KV390038.1:subseq(874322,100272)-genewise-prediction-1
KV390038.1:subseq(874322,100272) GeneWise cds 19127 19089 0.00 - 0 KV390038.1:subseq(874322,100272)-genewise-prediction-1
//