genewise output Score 1265.51 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000036_1.0 60 GRGERLPRGFARVVRVASEGSVRRPSGPVPAPQPPAFRFVSRPGRARSE GRGE+ PRGF RV V S+ SVR S PVPAP P AFRFVS PG A SE GRGEQRPRGFVRVWIVGSKSSVRHTSAPVPAPPPSAFRFVSGPGPAGSE KV389994.1:subs28771 gcggccccgtgcgtaggaaaagccatgcgcgccctgtctgagcgcggag gggaagcggttgtgttggaggtgacccctccccccctgttggcgccgga ggcgggtcacggggcgccgcctcccacgcgaggttgtgtgcgccgcgcg SPP00000036_1.0 109 SETLERSP------------PQSPGPGKAGDAPNRRSGHVRGARVLSPP SETLE+SP P+SPGPGKAGDAPNRR GHVRGARV SPP SETLEQSPRPPPQAPKSSKSPKSPGPGKAGDAPNRRPGHVRGARVASPP KV389994.1:subs28918 agacgctccccccgcattatcatcgcgaggggcacccgcgcggcggtcc gactaaccgcccaccaccaccaccgcgacgaccaggcgatggcgtcccc cacggggagggtgggggaggggggtgagactccccagcccccgcggggt SPP00000036_1.0 146 GRRARLSSPGPSRSSEAREELRRHLVGLIERSRVVIFSKSYCPHSTR RRARL+SPGPS SSEAREELRR L+GLIER VVIFSKSYCPHSTR ERRARLASPGPSSSSEAREELRRRLLGLIERGGVVIFSKSYCPHSTR KV389994.1:subs29065 gccgccgtcgcaattggcggccccccgcagcggggataaattccaac aggcgtcccgcggccacgaatgggttgttagggttttgagagcagcg gcctcggccgccctcgccgggccctgcccgccgggcccgcctcccgg SPP00000036_1.0 193 VKELFSSLGVECNVLELDQV VKELFSSLG EC VLELDQV VKELFSSLGAECYVLELDQV KV389994.1:subs29206 GTAGGCG Intron 1 CAGgagcttttgggttgtgcgcg <0-----[29206:34710]-0>taattcctgcagattataat gaacttcgatattcgattat SPP00000036_1.0 213 DGARVQEVLSEITNQKTVPNIFV DGA++QEVL EITNQKTVPNIFV D:D[gat] DGAKIQEVLLEITNQKTVPNIFV KV389994.1:subs34771 GGTAAGTA Intron 2 TAGATgggaacggctgaaacaagcaatg <1-----[34772:35783]-1> agcataatttatcaaactcattt tgcgtaaggaacttgacgctttg SPP00000036_1.0 237 NKVHVGGCDQTFQ AYQSGLLQKLLQE NKVHVGGCDQTFQ AYQSGLLQKLL E NKVHVGGCDQTFQ AYQSGLLQKLLHE KV389994.1:subs35855 aagcgggtgcatcGTAATAA Intron 3 TAGgtcagttcacccg aatatgggaacta<0-----[35894:38705]-0>caaggttaattaa tagtatatcatcg atgttggggcttg SPP00000036_1.0 263 DLAYDYDLIIIGGGSGGLSCAK EAAI D AYDYDLI+IGGGSGGLSCAK EAAI DSAYDYDLIVIGGGSGGLSCAK EAAI KV389994.1:subs38745 gtgtgtgcagagggtggcttgaGTATGAA Intron 4 TAGggga accaaaattttgggcggtcgca<0-----[38811:39055]-0>acct taatttcgccctttttctgtag atct SPP00000036_1.0 289 LGKKVMVLDFVVPSPQGTSW LGG LGKKVMVLDFVVPSPQGTSW LGG LGKKVMVLDFVVPSPQGTSW G:G[ggt] LGG KV389994.1:subs39068 tgaagagcgtggctccgattGGTAAGCT Intron 5 CAGGTcgg tgaattttatttcccagccg <1-----[39129:41019]-1> tgg gagatggacttcgatgcatg ttc SPP00000036_1.0 313 TCVNVGCIPKKLMHQAALLGQALCDSRKFGWEYNQQ TCVNVGC+PKKLMHQAALLGQAL DSRKFGWEYNQQ TCVNVGCVPKKLMHQAALLGQALHDSRKFGWEYNQQ KV389994.1:subs41031 atgaggtgcaataccggctgcgtcgtaatgtgtacc cgtatggtcaattaaccttgactaacgatggaaaaa ttatattttgaggtgtctgggaatcaggtcggttaa SPP00000036_1.0 349 RHNWETMTKAIQNHISSLNWGYR HNWETMTKAIQNHI SLN+GY V:V[gtg] THNWETMTKAIQNHIRSLNFGYG KV389994.1:subs41139 GGTGAGTA Intron 6 TAGTGacatgaaaagacacactcatgtg <1-----[41140:45043]-1> caagactcactaaatgctatgag gccggggaagtgcccctactccg SPP00000036_1.0 373 LSLREKAVAYVNSYGEFVEHHKIK AT LSLREKAVAYVNSYGEFVEHHKIK AT LSLREKAVAYVNSYGEFVEHHKIK AT KV389994.1:subs45115 tttagagggtgattggtggccaaaGTACCGT Intron 7 AAGga tctgaactcatacagattaaaata<0-----[45187:49106]-0>cc gtggagtgctctctaattatcaag ac SPP00000036_1.0 399 NKKGQETYYTAAQFVIATGERPRYLGIQGDKEYCIT NKKGQETYYTAAQFVIATGERPRYLGIQGDKEYCIT NKKGQETYYTAAQFVIATGERPRYLGIQGDKEYCIT KV389994.1:subs49113 aaagcgattaggctgagaggaccttgacggagttaa aaagaacaacccatttccgagcgatgtagaaaagtc taaagatttttagtcaagtagggtaacaataacttc SPP00000036_1.0 435 DDLFSLPYCPGKTLVVGASYVAL DDLFSLPYCPGKTLVVGASYVAL S:S[agt] DDLFSLPYCPGKTLVVGASYVAL KV389994.1:subs49221 AGGTAAGGT Intron 8 CAGTggcttccttcgaatggggttggc <2-----[49223:50013]-2> aattctcagcgactttgccatct tctttgttctcagaggtctcccg SPP00000036_1.0 459 ECAGFLAGFGLDVTVMVRSILLRGFDQEMAEKVGSYMEQHGVKFLRKFI ECAGFLAGFGLDVTVMVRSILLRGFDQEMAEKVGSYMEQHGV+FL KFI ECAGFLAGFGLDVTVMVRSILLRGFDQEMAEKVGSYMEQHGVRFLWKFI KV389994.1:subs50084 gtggtcggtgcggagagctacccgtgcgaggaggttagccggatctata agcgttcgtgtatctttgctttggtaaatcaatgcataaagtgttgatt gtagtgtctcatcatgacactctctcaagagagtctgggttggcagaca SPP00000036_1.0 508 PVM VQQLEKGSPGKLKVLAKSTEGTE PVM VQQLEKGSPGKLKVLAKSTEGTE PVM VQQLEKGSPGKLKVLAKSTEGTE KV389994.1:subs50231 cgaGTAAGGC Intron 9 TAGgcctgagtcgacagtgataggag ctt<0-----[50240:51499]-0>taataagccgatattcaccagca tgg tagggatataggaagtactaaaa SPP00000036_1.0 534 TIEGVYNT VLLAIGRDSCTRKIGLEK TIE VYNT VLLAIGRDSCTRKIGLEK TIEEVYNT VLLAIGRDSCTRKIGLEK KV389994.1:subs51569 aagggtaaGTGAGTT Intron 10 CAGgttgagcgttaaaagtga ctaataac<0-----[51593:58462]-0>tttctggacgcgatgtaa ataactca tgattttcctagaagggg SPP00000036_1.0 560 IGVKINE SGKIPVNDVEQTNVPY IGVKINE SGKIPVNDVEQT+VPY IGVKINE K:K[aaa] SGKIPVNDVEQTSVPY KV389994.1:subs58517 aggaaagAAGTAAGTG Intron 11 CAGAagaacgagggcaagct tgtataa <2-----[58540:59109]-2> ggatctaataacgtca ttcattg taaatattgagcttat SPP00000036_1.0 584 VYAVGDILEDKPELTPVAIQSGKLLAQRLFGASLEK VYAVGDILE KPELTPVAIQSGKLLA+RLFGASLEK VYAVGDILEGKPELTPVAIQSGKLLARRLFGASLEK KV389994.1:subs59159 gtggggatggacgcacggactgaccgcactggttga tactgattagacatcctctacgattcggttgcctaa ctttgttggtgagcttccagacggatgattgctaag SPP00000036_1.0 620 CDYINVPTTVFTPLEYGCCGLSEEKA CDYINVPTTVFTPLEYGCCGLSEEKA CDYINVPTTVFTPLEYGCCGLSEEKA KV389994.1:subs59267 GTAAGTT Intron 12 CAGtgtaagcaagtaccgtgttgttggag <0-----[59267:65248]-0>gaatatcccttcctaaggggtcaaac ttttttatggtttggttctaataggt SPP00000036_1.0 646 IEVYKKENLE IYHTLFWPLEWTVAGR IEVYKKENLE IYHTLFWPLEWTVAGR IEVYKKENLE IYHTLFWPLEWTVAGR KV389994.1:subs65327 aggtaagacgGTAAGAT Intron 13 CAGatcatttccgtaggga tataaaaata<0-----[65357:66060]-0>taacttgctagctcgg taataagtaa atttgcgttagaatca SPP00000036_1.0 672 ENNTCYAKIICNKFDH DRVIGFHILG ENNTCYAKIICNKFDH DRVIGFHILG ENNTCYAKIICNKFDH DRVIGFHILG KV389994.1:subs66109 gaaattgaaataatgcGTATGTA Intron 14 AAGgcgagtcacg aaacgacattgaataa<0-----[66157:68679]-0>agttgtattg gccttcagacctacct tggagtttta SPP00000036_1.0 698 PNAGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCGE PNAGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCGE PNAGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCGE KV389994.1:subs68710 caggggacgtgggaatgcaacccggaagaccatgg cacgatcagtccctaggtcaattaactgtaccgga atctgtcactatagactcaagattcctatccatgg SPP00000036_1.0 733 VFTTLEITKSSGLDITQKGC VFTTLEITKSSGLDITQKGC VFTTLEITKSSGLDITQKGC KV389994.1:subs68815 GTAGGAA Intron 15 CAGgtaatgaaattgcgaacagt <0-----[68815:69334]-0>ttcctatcaccgtatcaagg gcatgacaacaaacctgacc // Making a D in phase 1 intron Making a G in phase 1 intron Making a V in phase 1 intron Making a S in phase 2 intron Making a K in phase 2 intron >KV389994.1:subseq(492455,100245).pep GRGEQRPRGFVRVWIVGSKSSVRHTSAPVPAPPPSAFRFVSGPGPAGSESETLEQSPRPP PQAPKSSKSPKSPGPGKAGDAPNRRPGHVRGARVASPPERRARLASPGPSSSSEAREELR RRLLGLIERGGVVIFSKSYCPHSTRVKELFSSLGAECYVLELDQVDDGAKIQEVLLEITN QKTVPNIFVNKVHVGGCDQTFQAYQSGLLQKLLHEDSAYDYDLIVIGGGSGGLSCAKEAA ILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCVPKKLMHQAALLGQALHDSRKFGWEYNQ QVTHNWETMTKAIQNHIRSLNFGYGLSLREKAVAYVNSYGEFVEHHKIKATNKKGQETYY TAAQFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPGKTLVVGASYVALECAGFLAGF GLDVTVMVRSILLRGFDQEMAEKVGSYMEQHGVRFLWKFIPVMVQQLEKGSPGKLKVLAK STEGTETIEEVYNTVLLAIGRDSCTRKIGLEKIGVKINEKSGKIPVNDVEQTSVPYVYAV GDILEGKPELTPVAIQSGKLLARRLFGASLEKCDYINVPTTVFTPLEYGCCGLSEEKAIE VYKKENLEIYHTLFWPLEWTVAGRENNTCYAKIICNKFDHDRVIGFHILGPNAGEVTQGF AAAMKCGLTKQLLDDTIGIHPTCGEVFTTLEITKSSGLDITQKGC // >KV389994.1:subseq(492455,100245).[28771:69394].sp GGGCGGGGCGAGCAGCGGCCTCGCGGATTCGTGCGGGTGTGGATCGTGGGCAGCAAGAGC AGCGTTCGCCACACCTCAGCCCCGGTCCCGGCACCGCCGCCTTCTGCGTTTCGGTTTGTG AGCGGGCCCGGCCCGGCCGGGAGCGAGAGCGAAACCCTGGAGCAGTCGCCACGGCCGCCG CCTCAGGCGCCGAAGTCGTCAAAGTCGCCGAAGTCGCCGGGTCCGGGAAAGGCAGGCGAT GCCCCCAACCGCCGACCGGGCCACGTCCGCGGCGCGCGCGTGGCGTCGCCGCCTGAGCGC CGCGCTCGCCTGGCGTCCCCCGGGCCCAGCAGCTCTTCCGAGGCCCGCGAGGAGCTGCGC CGCCGCCTTCTGGGCCTCATCGAGCGCGGCGGGGTGGTGATCTTCAGCAAGAGCTACTGT CCCCACAGCACGCGGGTGAAAGAACTCTTTTCTTCCTTGGGAGCTGAATGTTATGTCTTG GAACTTGATCAAGTTGATGATGGGGCCAAGATTCAAGAAGTGCTGTTAGAAATCACTAAT CAGAAAACCGTGCCCAATATTTTTGTGAATAAAGTGCATGTAGGTGGATGTGACCAAACT TTCCAGGCATATCAGAGTGGTTTGTTGCAGAAGCTCCTTCATGAGGATTCAGCATATGAT TATGACCTGATCGTCATCGGTGGTGGTTCTGGTGGCCTTTCGTGTGCAAAGGAAGCTGCC ATTTTGGGAAAGAAAGTTATGGTGCTAGACTTTGTTGTCCCGTCACCTCAGGGCACATCT TGGGGTCTTGGTGGCACTTGTGTAAATGTAGGTTGTGTTCCTAAGAAATTGATGCATCAG GCTGCCCTTTTGGGGCAGGCATTACATGACTCAAGGAAGTTTGGCTGGGAGTATAATCAA CAAGTGACGCACAACTGGGAGACGATGACAAAAGCGATTCAGAACCACATCCGCTCTCTA AACTTTGGCTACGGGTTGTCTTTGAGGGAAAAGGCTGTGGCCTATGTCAATTCCTATGGA GAATTTGTTGAACATCACAAAATAAAGGCAACCAATAAAAAAGGACAGGAAACTTATTAT ACTGCTGCACAGTTTGTCATAGCAACGGGTGAAAGGCCGCGGTATTTAGGAATCCAAGGA GATAAAGAATACTGTATTACCAGTGATGACCTTTTTTCTCTGCCTTATTGCCCTGGCAAA ACGTTAGTGGTGGGTGCCTCTTACGTCGCCCTGGAGTGTGCAGGGTTTCTGGCTGGCTTT GGCCTAGATGTCACAGTTATGGTACGCTCAATCCTTCTCCGTGGCTTTGACCAAGAAATG GCAGAGAAAGTGGGTTCCTATATGGAGCAGCATGGTGTGAGGTTCCTATGGAAATTCATA CCTGTGATGGTTCAACAGTTGGAGAAAGGTTCACCTGGAAAGCTGAAAGTATTGGCTAAA TCCACTGAAGGAACAGAAACAATTGAAGAAGTCTATAACACAGTTTTGTTAGCTATTGGT CGTGACTCCTGTACAAGGAAAATAGGGTTGGAGAAGATTGGTGTCAAAATTAATGAGAAA AGTGGAAAAATACCTGTAAATGATGTGGAACAGACCAGTGTTCCATATGTCTATGCTGTT GGGGATATTTTGGAGGGTAAGCCAGAGCTCACTCCTGTCGCCATACAGTCAGGCAAGCTG CTAGCTCGGAGACTTTTTGGGGCCTCTTTAGAAAAGTGTGATTATATTAATGTTCCAACT ACGGTGTTTACTCCTCTGGAGTATGGTTGCTGTGGATTATCTGAAGAGAAGGCTATTGAA GTATATAAAAAAGAGAATCTAGAAATATATCATACTTTGTTCTGGCCTCTTGAATGGACA GTAGCTGGCAGAGAGAACAACACTTGTTACGCAAAGATAATCTGCAATAAATTCGACCAT GATCGGGTGATAGGGTTTCATATTCTTGGACCAAATGCCGGTGAGGTTACCCAAGGCTTT GCAGCTGCAATGAAATGCGGTCTCACAAAACAGCTACTTGATGACACCATTGGAATTCAC CCCACATGTGGGGAGGTGTTCACAACTTTGGAAATCACAAAATCCTCAGGACTAGACATC ACTCAGAAAGGCTGC // KV389994.1:subseq(492455,100245) GeneWise match 28771 69394 1276.49 + . KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise cds 28771 29205 0.00 + 0 KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise intron 29206 34710 0.00 + . KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise cds 34711 34771 0.00 + 0 KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise intron 34772 35783 0.00 + . KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise cds 35784 35893 0.00 + 2 KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise intron 35894 38705 0.00 + . KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise cds 38706 38810 0.00 + 0 KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise intron 38811 39055 0.00 + . KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise cds 39056 39128 0.00 + 0 KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise intron 39129 41019 0.00 + . KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise cds 41020 41139 0.00 + 2 KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise intron 41140 45043 0.00 + . KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise cds 45044 45186 0.00 + 2 KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise intron 45187 49106 0.00 + . KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise cds 49107 49222 0.00 + 0 KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise intron 49223 50013 0.00 + . KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise cds 50014 50239 0.00 + 1 KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise intron 50240 51499 0.00 + . KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise cds 51500 51592 0.00 + 0 KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise intron 51593 58462 0.00 + . KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise cds 58463 58539 0.00 + 0 KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise intron 58540 59109 0.00 + . KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise cds 59110 59266 0.00 + 1 KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise intron 59267 65248 0.00 + . KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise cds 65249 65356 0.00 + 0 KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise intron 65357 66060 0.00 + . KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise cds 66061 66156 0.00 + 0 KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise intron 66157 68679 0.00 + . KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise cds 68680 68814 0.00 + 0 KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise intron 68815 69334 0.00 + . KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise cds 69335 69394 0.00 + 0 KV389994.1:subseq(492455,100245)-genewise-prediction-1 // genewise output Score 32.86 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000036_1.0 55 RGGVGGRGERLPRGFARVVRVASEGSVRRPSGPVPAPQPPAFRFVSRPG RG VGG G RLP F A+ P A P FR SRPG RGPVGGWGHRLP--FPDPATSATL-TTSAPEAAAVATAP-GFRSRSRPG KV389994.1:sub-29035 cgcgggtgcccc tcgcgatgat aatgcggggggagc gtctctccg ggctggggagtc tcacccccct cccccaccctcccc gtgcgcgcg tcgcctggtcgt cgcggtggtg gtggtgggcggtta gtctccggc SPP00000036_1.0 104 RARSESETLERSPPQSPGPG RARS++ET + + P GPG RARSQTETQKAAVP---GPG KV389994.1:sub-28900 cgctcagacagggc gcg gcgcacacaacctc gcg gccaacaggggggg agg // >KV389994.1:subseq(492455,100245).pep RGPVGGWGHRLPFPDPATSATLTTSAPEAAAVATAPGFRSRSRPGRARSQTETQKAAVPG PG // >KV389994.1:subseq(492455,100245).[29035:28848].sp CGTGGCCCGGTCGGCGGTTGGGGGCATCGCCTGCCTTTCCCGGACCCGGCGACTTCGGCG ACTTTGACGACTTCGGCGCCTGAGGCGGCGGCCGTGGCGACTGCTCCAGGGTTTCGCTCT CGCTCCCGGCCGGGCCGGGCCCGCTCACAAACCGAAACGCAGAAGGCGGCGGTGCCGGGA CCGGGG // KV389994.1:subseq(492455,100245) GeneWise match 29035 28850 35.86 - . KV389994.1:subseq(492455,100245)-genewise-prediction-1 KV389994.1:subseq(492455,100245) GeneWise cds 29035 28850 0.00 - 0 KV389994.1:subseq(492455,100245)-genewise-prediction-1 //