genewise output
Score 193.37 bits over entire alignment
Scores as bits over a synchronous coding model
Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info
SPP00000366_2.0 105 GWPSFHDVISSEAITFTDDFSYGMHRVETSCSQ
GWPSFHDVISSEAITFTDDFSYGMHRVETSCSQ
GWPSFHDVISSEAITFTDDFSYGMHRVETSCSQ
KV389988.1:subs41240 gtcttcggaatggaataggtttgacaggaattc
ggcctaattgcactctcaatcagtagtacggca
tgtacctgcttgacacatctccggcggaacctg
SPP00000366_2.0 138 CGAHLGHIFDDGPRPTGKRYCINSAA
CGAHLGHIFDDGPRPTGKRYCINSAA
CGAHLGHIFDDGPRPTGKRYCINSAA
KV389988.1:subs41339 GTGAGTT Intron 1 CAGtggccgcatgggcccagaattaatgg
<0-----[41339:50041]-0>ggcatgattaagcgccgagagtaccc
ttcctgcttttgttatgaaccatgtc
SPP00000366_2.0 164 LSFTPVDSDGAAAEGGSGVASPAQADKAE
LSFTP DS GAA EGGSGVASPA+ADK E
LSFTPADSGGAATEGGSGVASPARADKEE
KV389988.1:subs50120 tttacggaggggagggagggacgcggagg
tctcccagggcccaggggtcgccgcaaaa
atcatgttttcccggctgcccccgccagg
//
>KV389988.1:subseq(99822,100209).pep
GWPSFHDVISSEAITFTDDFSYGMHRVETSCSQCGAHLGHIFDDGPRPTGKRYCINSAAL
SFTPADSGGAATEGGSGVASPARADKEE
//
>KV389988.1:subseq(99822,100209).[41240:50206].sp
GGTTGGCCTTCATTCCACGATGTGATCAGTTCTGAGGCAATCACATTCACAGATGACTTT
TCCTACGGGATGCACAGGGTGGAAACAAGCTGCTCTCAGTGTGGTGCCCACCTTGGGCAC
ATTTTTGATGATGGGCCTCGTCCAACTGGGAAAAGATACTGCATAAATTCGGCTGCCTTA
TCTTTCACACCTGCGGATAGTGGTGGTGCCGCCACCGAGGGGGGCAGTGGGGTCGCCAGC
CCCGCCCGGGCCGACAAAGAGGAG
//
KV389988.1:subseq(99822,100209) GeneWise match 41240 50206 193.37 + . KV389988.1:subseq(99822,100209)-genewise-prediction-1
KV389988.1:subseq(99822,100209) GeneWise cds 41240 41338 0.00 + 0 KV389988.1:subseq(99822,100209)-genewise-prediction-1
KV389988.1:subseq(99822,100209) GeneWise intron 41339 50041 0.00 + . KV389988.1:subseq(99822,100209)-genewise-prediction-1
KV389988.1:subseq(99822,100209) GeneWise cds 50042 50206 0.00 + 0 KV389988.1:subseq(99822,100209)-genewise-prediction-1
//
genewise output
Score 18.31 bits over entire alignment
Scores as bits over a synchronous coding model
Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info
SPP00000366_2.0 5 QTLPRPSRFALPLTLP
+T+ RP+R LPL P
KTIIRPNRVLLPLQSP
KV389988.1:sub-67017 aaaaacaagccctctc
acttgcagtttctacc
aaccattactcaagca
//
>KV389988.1:subseq(99822,100209).pep
KTIIRPNRVLLPLQSP
//
>KV389988.1:subseq(99822,100209).[67017:66968].sp
AAAACAATCATCAGACCTAATAGAGTCCTTCTCCCATTACAGTCCCCA
//
KV389988.1:subseq(99822,100209) GeneWise match 67017 66970 18.31 - . KV389988.1:subseq(99822,100209)-genewise-prediction-1
KV389988.1:subseq(99822,100209) GeneWise cds 67017 66970 0.00 - 0 KV389988.1:subseq(99822,100209)-genewise-prediction-1
//