genewise output
Score 20.04 bits over entire alignment
Scores as bits over a synchronous coding model
Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info
SPP00000379_2.0 217 TRDPSGPFLMSVDHCFSI
TRD +GP L+ H F I
TRDHTGPALLESSHLFYI
KV389883.1:subs65392 acgcagcgttgatcctta
cgaacgccttagcattat
taccttaaagactttcct
//
>KV389883.1:subseq(934747,100659).pep
TRDHTGPALLESSHLFYI
//
>KV389883.1:subseq(934747,100659).[65392:65445].sp
ACTCGAGACCACACTGGTCCAGCATTATTGGAAAGCTCTCATCTTTTCTACATT
//
KV389883.1:subseq(934747,100659) GeneWise match 65392 65445 20.04 + . KV389883.1:subseq(934747,100659)-genewise-prediction-1
KV389883.1:subseq(934747,100659) GeneWise cds 65392 65445 0.00 + 0 KV389883.1:subseq(934747,100659)-genewise-prediction-1
//
genewise output
Score 642.77 bits over entire alignment
Scores as bits over a synchronous coding model
Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info
SPP00000379_2.0 262 KVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCAPESLH
+VVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCAPESLH
QVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCAPESLH
KV389883.1:sub-50659 cggaagatacatcacaatgacggccgatgactgcaccgcgtgtgcgtcc
attaatactattatctccctagagtgtgtcatacattaggttgccacta
gggggggcgggctgcctacgaacggcctccgtccggggcgggtctgcgc
SPP00000379_2.0 311 TVHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGKLMFFTPAPDNFD
TVHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGKLMFFTPAPDNFD
TVHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGKLMFFTPAPDNFD
KV389883.1:sub-50512 agcggcatggaacttcgcccaagatcaaggcgagagatattacgcgatg
ctaccttctaatcatggctacacatatctgaacttgattttccccaata
tccactctgagaattggcggcgcgcctagctgacgcgggcccttatctc
SPP00000379_2.0 360 QEPILDSFDFTQEYLFQEQYLYKDLASAVTDNDEADKKAGQATEGLCPR
QEPILDSFDFTQEYLFQEQYL KDLASAVTDNDEADKKAGQAT G CPR
QEPILDSFDFTQEYLFQEQYLCKDLASAVTDNDEADKKAGQATVGHCPR
KV389883.1:sub-50365 cgcacgttgtacgtctcgctttagtgtggagaggggaaggcgaggctcc
aacttactatcaaattaaaatgaatccctcaaaacaaacgacctgagcg
gatagccccctaacccgggcacgtgaaagacttgccggtcgcagctctg
SPP00000379_2.0 409 QQWALVEFEKPVTCPRLCLVIGSRLDADIHSNTCRLAFHGILLHGLEDR
QQWALVEFEKPVTCPRLCLVIGSRLDADIH+NTCRLAFHGILLHGLEDR
QQWALVEFEKPVTCPRLCLVIGSRLDADIHANTCRLAFHGILLHGLEDR
KV389883.1:sub-50218 cctgcggtgacgatccctcgagtacgggacgaatccgtcgacccgcgga
aagcttataactcgcgtgtttgcgtacatacacggtctagtttagtaag
gggcgggtggcccttgacggtccgatgcttccacggcctccgctgggcg
SPP00000379_2.0 458 NYADSFLPRLKVYKLKHKHGLVER AM
NYADSFLPRLKVYKLKHKHGLVER AM
NYADSFLPRLKVYKLKHKHGLVER AM
KV389883.1:sub-50071 atggatccacagtacacacgcggcGTGAGCA Intron 1 CAGga
aacagttcgtataataaaagttag<0-----[49999:33311]-0>ct
ctccccgcgaggcgggcgtccggg ag
SPP00000379_2.0 484 DDYSVIGRSLFKKETNIQLFVGLKVHLSTGELGIIDSAFGQSGKFKIHI
DDYSVIGRSLFKKETNIQLFVGLKVHLSTGELGIIDSAFGQSGKFKIHI
DDYSVIGRSLFKKETNIQLFVGLKVHLSTGELGIIDSAFGQSGKFKIHI
KV389883.1:sub-33304 ggtagagctctaagaaacctggcagcctaggcgaagagtgcagataaca
aaagttggcttaaacatatttgtatatccgatgttagctgaggatatat
tcctgccccgcaggcccgttggcggcgctgagcccctcccgccgcgccc
SPP00000379_2.0 533 PG
PG
PG
KV389883.1:sub-33157 cg
cg
at
//
>KV389883.1:subseq(934747,100659).pep
QVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCAPESLHTVHAALISVEK
IPYFRGPLQTKAKFHITVGHETVMGKLMFFTPAPDNFDQEPILDSFDFTQEYLFQEQYLC
KDLASAVTDNDEADKKAGQATVGHCPRQQWALVEFEKPVTCPRLCLVIGSRLDADIHANT
CRLAFHGILLHGLEDRNYADSFLPRLKVYKLKHKHGLVERAMDDYSVIGRSLFKKETNIQ
LFVGLKVHLSTGELGIIDSAFGQSGKFKIHIPG
//
>KV389883.1:subseq(934747,100659).[50659:33150].sp
CAGGTGGTGAAGAAGGTGAAGTCCATGCAGATGTTCCATATGCCCATCACTTCAGCCATG
CAAGGAGACCGGCTGGGCATCTGTGTCACCCAGTTTGACCCCAAGCTGCTGGAGCGCGGG
TTGGTGTGTGCCCCTGAGTCCCTGCACACTGTCCACGCAGCCCTTATCTCTGTGGAAAAG
ATACCATATTTTCGGGGGCCCCTGCAGACCAAGGCCAAGTTCCACATTACAGTGGGCCAT
GAGACAGTCATGGGCAAGTTGATGTTCTTCACCCCTGCTCCAGATAACTTTGACCAGGAA
CCTATACTGGACTCCTTCGACTTCACTCAAGAATACCTCTTCCAGGAGCAGTACTTATGC
AAGGATTTGGCATCAGCAGTGACAGACAATGATGAGGCCGACAAGAAGGCTGGCCAGGCC
ACAGTGGGCCATTGCCCTCGGCAGCAGTGGGCCCTGGTGGAGTTTGAGAAGCCCGTCACC
TGTCCTCGGCTATGCCTGGTGATTGGCTCCAGGCTAGATGCGGACATTCATGCCAACACA
TGCCGGCTGGCCTTCCATGGCATCCTGCTCCATGGGCTGGAGGACAGGAACTATGCCGAC
AGCTTCCTGCCCAGGCTAAAGGTGTACAAGCTGAAGCACAAGCATGGCCTCGTGGAGCGG
GCAATGGATGACTACAGTGTGATCGGCCGCTCCCTGTTCAAAAAGGAGACCAACATCCAG
CTTTTTGTGGGGCTCAAGGTGCACCTGTCCACTGGGGAACTGGGCATCATCGACAGTGCC
TTCGGCCAGAGCGGCAAGTTCAAGATCCACATCCCAGGT
//
KV389883.1:subseq(934747,100659) GeneWise match 50659 33152 642.77 - . KV389883.1:subseq(934747,100659)-genewise-prediction-1
KV389883.1:subseq(934747,100659) GeneWise cds 50659 50000 0.00 - 0 KV389883.1:subseq(934747,100659)-genewise-prediction-1
KV389883.1:subseq(934747,100659) GeneWise intron 49999 33311 0.00 - . KV389883.1:subseq(934747,100659)-genewise-prediction-1
KV389883.1:subseq(934747,100659) GeneWise cds 33310 33152 0.00 - 0 KV389883.1:subseq(934747,100659)-genewise-prediction-1
//