genewise output Score 236.94 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000360_2.0 1 LPPLPLLLLLAALAAPATAATTYRPDWNRLRGLTRARVE LPPLPLLLLLAALAAPATAATTYRPDWNRLRGLTRARVE LPPLPLLLLLAALAAPATAATTYRPDWNRLRGLTRARVE KV389684.1:subs47952 tcccccccccggcggcgaggaatccgtaccagcacgcgg tcctctttttcctcccccccccagcagagtggtcgcgta gtggggggtcggtgtacacctctggcgctgacgcccgag SPP00000360_2.0 40 TCGGXQLNRLKE TCGGXQLNRLKE TCGGXQLNRLKE KV389684.1:subs48069 GTGAGTA Intron 1 CAGatggtccaccag <0-----[48069:49471]-0>cggggatagtaa ctgaaggccagg SPP00000360_2.0 52 VKAFVTQDIPF VKAFVTQDIPF VKAFVTQDIPF KV389684.1:subs49508 GTGAGTT Intron 2 CAGgagtgacgact <0-----[49508:49723]-0>tacttcaatct ggtcctgctac SPP00000360_2.0 63 HNLVMKHLPGADPELVLLGRRYE HNLVMKHLPGADPELVLLGRRYE Y:Y[tat] HNLVMKHLPGADPELVLLGRRYE KV389684.1:subs49757 TAGTATCCT Intron 3 CAGTcacgaacccgggcgcgccgcctg <2-----[49759:50115]-2> aatttaatcgcacattttgggaa ccgggacctgcccgcgggccccg SPP00000360_2.0 87 ELE RIPLSEMTREEINALVQELGFYR ELE RIPLSEMTREEINALVQELGFYR ELE RIPLSEMTREEINALVQELGFYR KV389684.1:subs50186 gcgGTGAGGC Intron 4 CAGcaccagaacggaagcgcgcgttc ata<0-----[50195:50272]-0>gtctgatcgaatacttaatgtag agg ctgccagccagccgggggccccc SPP00000360_2.0 113 KAAPDAQVPPEYVWAPARPPVETSDHADL K APDAQVPPEYVWAPARPP ETSDH DL KVAPDAQVPPEYVWAPARPPEETSDHTDL KV389684.1:subs50342 aggcggcgccgtgtgcgaccggatgcagc atccacatccaatgcccgccaaccaacat gggccgggccgcgggctgcggatacctcg // Making a Y in phase 2 intron >KV389684.1:subseq(1556918,100428).pep LPPLPLLLLLAALAAPATAATTYRPDWNRLRGLTRARVETCGGXQLNRLKEVKAFVTQDI PFYHNLVMKHLPGADPELVLLGRRYEELERIPLSEMTREEINALVQELGFYRKVAPDAQV PPEYVWAPARPPEETSDHTDL // >KV389684.1:subseq(1556918,100428).[47952:50428].sp TTGCCTCCGCTGCCGCTGCTGCTGCTTCTCGCGGCGCTTGCGGCTCCAGCCACAGCCGCC ACTACCTATCGGCCGGACTGGAACCGTCTGAGAGGCCTGACCCGCGCCCGGGTAGAGACC TGTGGGGGATGACAGCTGAACCGCCTAAAGGAGGTGAAGGCTTTCGTCACTCAGGACATT CCATTCTATCACAACCTGGTGATGAAACACCTCCCTGGGGCCGACCCCGAGCTCGTGCTG CTGGGCCGCCGCTACGAGGAACTGGAGCGCATTCCGCTCAGCGAAATGACCCGCGAAGAG ATCAACGCGCTGGTGCAGGAGCTCGGCTTCTACCGCAAGGTGGCGCCCGACGCGCAGGTG CCCCCCGAGTACGTGTGGGCGCCCGCTAGGCCCCCGGAGGAAACTTCAGACCACACTGAC CTG // KV389684.1:subseq(1556918,100428) GeneWise match 47952 50428 236.94 + . KV389684.1:subseq(1556918,100428)-genewise-prediction-1 KV389684.1:subseq(1556918,100428) GeneWise cds 47952 48068 0.00 + 0 KV389684.1:subseq(1556918,100428)-genewise-prediction-1 KV389684.1:subseq(1556918,100428) GeneWise intron 48069 49471 0.00 + . KV389684.1:subseq(1556918,100428)-genewise-prediction-1 KV389684.1:subseq(1556918,100428) GeneWise cds 49472 49507 0.00 + 0 KV389684.1:subseq(1556918,100428)-genewise-prediction-1 KV389684.1:subseq(1556918,100428) GeneWise intron 49508 49723 0.00 + . KV389684.1:subseq(1556918,100428)-genewise-prediction-1 KV389684.1:subseq(1556918,100428) GeneWise cds 49724 49758 0.00 + 0 KV389684.1:subseq(1556918,100428)-genewise-prediction-1 KV389684.1:subseq(1556918,100428) GeneWise intron 49759 50115 0.00 + . KV389684.1:subseq(1556918,100428)-genewise-prediction-1 KV389684.1:subseq(1556918,100428) GeneWise cds 50116 50194 0.00 + 1 KV389684.1:subseq(1556918,100428)-genewise-prediction-1 KV389684.1:subseq(1556918,100428) GeneWise intron 50195 50272 0.00 + . KV389684.1:subseq(1556918,100428)-genewise-prediction-1 KV389684.1:subseq(1556918,100428) GeneWise cds 50273 50428 0.00 + 0 KV389684.1:subseq(1556918,100428)-genewise-prediction-1 // genewise output Score 21.52 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000360_2.0 72 PGADPELVLLGRRYEELERIP P + PEL L R Y RIP PSSHPELFLPAREYSAYPRIP KV389684.1:sub-27079 cttccgcttcgcgttgtcaac cccacatttccgaaccacgtc acccagccgttgatatccaac // >KV389684.1:subseq(1556918,100428).pep PSSHPELFLPAREYSAYPRIP // >KV389684.1:subseq(1556918,100428).[27079:27015].sp CCATCCTCCCACCCAGAGCTCTTCTTGCCTGCTCGGGAATATTCAGCTTACCCCAGAATA CCC // KV389684.1:subseq(1556918,100428) GeneWise match 27079 27017 21.52 - . KV389684.1:subseq(1556918,100428)-genewise-prediction-1 KV389684.1:subseq(1556918,100428) GeneWise cds 27079 27017 0.00 - 0 KV389684.1:subseq(1556918,100428)-genewise-prediction-1 //