genewise output
Score 281.98 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000317_2.0    1 VSLVVNVASDCQLTDRNYLALKELHKEFGPSHFSVLAFPCNQFGESEPR 
                     VSLVVNVASDCQLTDRNYLALKELHKEFGPSHFSVLAFPCNQFGESEPR 
                     VSLVVNVASDCQLTDRNYLALKELHKEFGPSHFSVLAFPCNQFGESEPR 
KV389639.1:subs50000 gtcggaggagtccagaattgcagccagtgctctagtgtctactggtgcc 
                     tctttatcgagatcagaatctaataaatgccatgttctcgaatgacacg 
                     taatacgttccacacatcaaggagcagtaaccccggtcgctgtaaggcc 


SPP00000317_2.0   50 PSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLR            
                     PSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFL             
                     PSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLV            
KV389639.1:subs50147 caagggttgaaatggatcatcaaaacgtgggcgtatcg            
                     cgaatactcgaaagtctcttaatattgcagacctgttt            
                     gcgaaattaaaccaaacccccgtgtaataaatatattt            


SPP00000317_2.0   88                           -------WNFWKYLVNPEGQVVK 
                                                      WNFWKYLVNPEGQVVK 
                               -:D[gat]        SSKKEPRWNFWKYLVNPEGQVVK 
KV389639.1:subs50261 GGTAAATA  Intron 1   TAGATttaagcatattatcgacggcgga 
                      <1-----[50262:52783]-1>  ccaaacggatgaattacagatta 
                                               taggaaggttggtgcctgtatgg 


SPP00000317_2.0  104 FWRPEEPIEVIRPDIAALVR                              
                     FWRPEEPIEVIRPDIAALVR                              
                     FWRPEEPIEVIRPDIAALVR                              
KV389639.1:subs52855 ttacggcaggaacgaggcga                              
                     tggcaactattgcatccttg                              
                     cggagactaccgtcaatgta                              


//
Making a D in phase 1 intron
>KV389639.1:subseq(28266,100287).pep
VSLVVNVASDCQLTDRNYLALKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARK
NYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIE
VIRPDIAALVR
//
>KV389639.1:subseq(28266,100287).[50000:52914].sp
GTTTCACTAGTTGTAAACGTGGCTAGTGACTGCCAACTCACAGACAGAAATTACTTAGCA
CTGAAGGAACTGCACAAAGAGTTTGGACCATCCCACTTCAGCGTGTTGGCTTTCCCGTGC
AATCAGTTTGGAGAATCGGAGCCCCGCCCGAGCAAGGAAGTAGAATCTTTTGCAAGAAAA
AACTACGGAGTAACATTCCCCATCTTCCACAAGATTAAGATTCTAGGATCTGAAGGAGAA
CCTGCATTTAGATTTCTTGTTGATTCTTCAAAGAAGGAACCAAGGTGGAATTTTTGGAAG
TATCTGGTCAACCCTGAGGGTCAAGTTGTGAAGTTCTGGAGGCCAGAGGAACCCATTGAA
GTCATCAGGCCTGACATAGCAGCTCTGGTTAGA
//
KV389639.1:subseq(28266,100287)	GeneWise	match	50000	52914	287.97	+	.	KV389639.1:subseq(28266,100287)-genewise-prediction-1
KV389639.1:subseq(28266,100287)	GeneWise	cds	50000	50261	0.00	+	0	KV389639.1:subseq(28266,100287)-genewise-prediction-1
KV389639.1:subseq(28266,100287)	GeneWise	intron	50262	52783	0.00	+	.	KV389639.1:subseq(28266,100287)-genewise-prediction-1
KV389639.1:subseq(28266,100287)	GeneWise	cds	52784	52914	0.00	+	2	KV389639.1:subseq(28266,100287)-genewise-prediction-1
//

genewise output
Score 19.08 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000317_2.0   85 FLRWNFWKYLVNP                                     
                     +LRW+ W +L  P                                     
                     ILRWDSWSHLTLP                                     
KV389639.1:subs-6552 acatgtttccatc                                     
                     ttggacgcatctc                                     
                     cgagcagcctagt                                     


//
>KV389639.1:subseq(28266,100287).pep
ILRWDSWSHLTLP
//
>KV389639.1:subseq(28266,100287).[6552:6512].sp
ATCCTGAGATGGGACTCATGGTCCCACCTTACATTGCCT
//
KV389639.1:subseq(28266,100287)	GeneWise	match	6552	6514	19.08	-	.	KV389639.1:subseq(28266,100287)-genewise-prediction-1
KV389639.1:subseq(28266,100287)	GeneWise	cds	6552	6514	0.00	-	0	KV389639.1:subseq(28266,100287)-genewise-prediction-1
//