genewise output
Score 809.91 bits over entire alignment
Scores as bits over a synchronous coding model
Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info
SPP00000359_2.0 1 QYSAVDTNPLSLYVMHPFWNTIVK IF
QYSAVDTNPLSLYVMHPFWNTIVK +F
QYSAVDTNPLSLYVMHPFWNTIVK VF
KV389606.1:subs43708 ctagggaacctttgaccttaaagaGTAAGAT Intron 1 TAGgt
aagctacactctattactgactta<0-----[43780:44204]-0>tt
gcttgcctattgtggtatgctaag at
SPP00000359_2.0 27 PTWLAPNLITFSGFLLVVFNFLLMAYFDPDFYAS
PTWLAPNLITFSGFLLVVFNFLLMAYFDPDFYAS
PTWLAPNLITFSGFLLVVFNFLLMAYFDPDFYAS
KV389606.1:subs44211 catcgcacaattgtccggtatccagttgcgttgt
ccgtccattctcgttttttattttcatacatacc
ttggtctgatttctggtacttgagactttcttca
SPP00000359_2.0 61 PGHKHVPDWVWIVVGILNFVAYT
PGHKHVPDWVWIVVGILNFVAYT
A:A[gca] PGHKHVPDWVWIVVGILNFVAYT
KV389606.1:subs44313 GGTAAGAA Intron 2 CAGCAcgcacgcgtgtagggacatggta
<1-----[44314:46513]-1> cgaaatcagtgtttgttattcac
gtcgtgtcgtgtagcccctacct
SPP00000359_2.0 85 L GVDGKQARRTNSSTPLGELFDH
L GVDGKQARRTNSSTPLGELFDH
L D:D[gat] GVDGKQARRTNSSTPLGELFDH
KV389606.1:subs46585 cGGTAAGGA Intron 3 CAGATggggacgcaaataactggctgc
t <1-----[46589:50009]-1> gtagaacggcacgcctgattaa
a tacagatgacttctcaggttct
SPP00000359_2.0 109 GLDSWSCVYFVVTVYSIFGRGSTGVSVFVLYLLLWVVLFSFILSHWEKY
GLDSWSCVYFVVTVYSIFGRGSTGVSVFVLYLLLWVVLFSFILSHWEKY
GLDSWSCVYFVVTVYSIFGRGSTGVSVFVLYLLLWVVLFSFILSHWEKY
KV389606.1:subs50078 gcgatttgttggagttatgagtaggagtgctccctggttttactctgat
gtaggcgtatttctacttgggccgtgttttatttgttttctttcagaaa
cgttgattcttatgtcctaaaattcttttttcgagatgttccgctgagt
SPP00000359_2.0 158 NTGILFLPWGYDISQV TISFVYIVTA
NTGILFLPWGYDISQV TISFVYIVTA
NTGILFLPWGYDISQV TISFVYIVTA
KV389606.1:subs50225 aagactcctgtgaacgGTAAGTA Intron 4 CAGaattgtagag
acgttttcggaatgat<0-----[50273:51582]-0>ctcttattcc
cggttcgagatctcgg ttttccagtg
SPP00000359_2.0 184 VVGVEAWYEPFLFNFLYRDLFTTMII
VVGVEAWYEPFLFNFLYRDLFTTMII
VVGVEAWYEPFLFNFLYRDLFTTMII G:G[ggc]
KV389606.1:subs51613 ggggggttgctctatttagctaaaaaGGTAAGAA Intron 5
ttgtacgaactttattagattccttt <1-----[51692:59924]
tgatgcgtatcgttcatacactagtt
SPP00000359_2.0 210 CALCVTLPMSLLNFF SYK
CALCVTLPMSLLNFF SYK
CALCVTLPMSLLNFF R:R[aga] SYK
KV389606.1:subs59922 TAGGCtgttgaccaattattAGGTAAGTA Intron 6 CAGAata
-1> gctgtctctgttatt <2-----[59974:61388]-2> gaa
taatgttagtaactc cta
SPP00000359_2.0 230 NNTLKHNSVYEAMVPFFSPCLLFILSTAWILWSPSDILEIHPRIFYFMV
NNTLKHNSVYEAMVPFFSPCLLFILSTAWILWSPSDILEIHPRIFYFMV
NNTLKHNSVYEAMVPFFSPCLLFILSTAWILWSPSDILEIHPRIFYFMV
KV389606.1:subs61399 aaatacatgtggagctttcttctattagtacttctgatgaccaatttag
aactaaactaacttcttccgtttttcccgttgcccattatacgttattt
tccgactactacgtccttacggctgtaggctgttattagattaacctgt
SPP00000359_2.0 279 GTAFANIT CQLIVCQMSSTRCPTLNW
GTAFANIT CQLIVCQMSSTRCPTLNW
GTAFANIT CQLIVCQMSSTRCPTLNW
KV389606.1:subs61546 gagtgaaaGTAAGAT Intron 7 CAGtccagtcaaaactcatat
gcctcatc<0-----[61570:62857]-0>gatttgatggcggcctag
aactctca tggttcagttcgtatgtg
SPP00000359_2.0 305 LLVPLFLVVLVVNLGVSSYIESIILYTLTTAFTLAHIHYGVRV
LLVPLFLVVLVVNLGVSSYIESIILYTLTTAFTLAHIHYGVRV
LLVPLFLVVLVVNLGVSSYIESIILYTLTTAFTLAHIHYGVRV
KV389606.1:subs62912 ccgccttggtggatggtttagaaactataagtacgcactggcg
tttcttttttttatgtccatagtttactccctctcataagtgt
ggttccgtcagacaagctctgctcataaattctgcccttaaag
SPP00000359_2.0 348 VKQLSSHFQIYPFSLRKPNSDXLGME
VKQLSSHFQIYPFSLRKPNSDXLGME
VKQLSSHFQIYPFSLRKPNSDXLGME
KV389606.1:subs63041 GTGAGTA Intron 8 TAGgaccaactcatctttaacatgtcgag
<0-----[63041:65473]-0>taatggatatactctgacacagtgta
agggccttgtcccaggaacataaaga
SPP00000359_2.0 374 EKNIGL
EKNIGL
EKNIGL
KV389606.1:subs65552 gaaagc
aaatgt
agttcg
//
Making a A in phase 1 intron
Making a D in phase 1 intron
Making a G in phase 1 intron
Making a R in phase 2 intron
>KV389606.1:subseq(44514,100272).pep
QYSAVDTNPLSLYVMHPFWNTIVKVFPTWLAPNLITFSGFLLVVFNFLLMAYFDPDFYAS
APGHKHVPDWVWIVVGILNFVAYTLDGVDGKQARRTNSSTPLGELFDHGLDSWSCVYFVV
TVYSIFGRGSTGVSVFVLYLLLWVVLFSFILSHWEKYNTGILFLPWGYDISQVTISFVYI
VTAVVGVEAWYEPFLFNFLYRDLFTTMIIGCALCVTLPMSLLNFFRSYKNNTLKHNSVYE
AMVPFFSPCLLFILSTAWILWSPSDILEIHPRIFYFMVGTAFANITCQLIVCQMSSTRCP
TLNWLLVPLFLVVLVVNLGVSSYIESIILYTLTTAFTLAHIHYGVRVVKQLSSHFQIYPF
SLRKPNSDXLGMEEKNIGL
//
>KV389606.1:subseq(44514,100272).[43708:65569].sp
CAGTACAGTGCTGTGGACACCAATCCACTTTCTTTGTATGTGATGCATCCATTTTGGAAC
ACTATAGTAAAGGTATTTCCTACTTGGCTGGCTCCCAATCTGATAACTTTTTCTGGCTTT
CTGCTGGTTGTATTCAATTTTCTGCTAATGGCATACTTTGATCCTGACTTTTATGCCTCA
GCACCGGGTCACAAGCATGTGCCTGACTGGGTTTGGATTGTAGTGGGCATCCTCAACTTT
GTAGCCTACACTCTAGATGGTGTAGACGGAAAGCAAGCTCGGAGAACCAATTCTAGCACT
CCCTTAGGGGAGCTTTTTGACCATGGCCTGGATAGTTGGTCATGTGTTTACTTTGTTGTA
ACTGTGTATTCCATCTTTGGAAGAGGATCAACTGGTGTCAGTGTTTTTGTTCTTTATCTC
CTGCTATGGGTAGTTTTGTTTTCTTTCATCCTGTCCCATTGGGAAAAGTATAACACGGGG
ATTCTTTTCCTGCCATGGGGATATGACATTAGCCAGGTGACTATTTCTTTTGTCTACATA
GTGACTGCGGTTGTGGGAGTTGAGGCCTGGTATGAACCTTTCCTGTTTAATTTCTTATAT
AGAGACCTATTCACTACAATGATTATTGGCTGTGCATTATGTGTGACTCTTCCAATGAGT
TTATTAAACTTTTTCAGAAGCTATAAAAATAACACCTTGAAACACAATTCAGTCTATGAA
GCCATGGTTCCCTTCTTTTCTCCATGCTTGCTGTTCATTTTGTCTACAGCGTGGATCCTT
TGGTCTCCTTCAGATATTTTAGAGATACATCCTAGAATATTCTACTTTATGGTTGGAACA
GCCTTTGCCAATATCACATGTCAGCTGATTGTTTGCCAAATGAGTAGTACCCGGTGTCCA
ACTTTGAATTGGCTGCTGGTTCCTCTCTTCTTGGTTGTCTTAGTGGTAAACTTAGGAGTG
TCCTCTTACATTGAGAGCATTATCCTATATACATTAACAACTGCTTTCACTCTGGCCCAC
ATCCATTATGGAGTACGAGTGGTAAAGCAGCTGAGCAGCCATTTTCAGATTTACCCCTTC
TCATTGAGGAAACCAAACTCAGATTGACTAGGAATGGAAGAAAAGAATATTGGCCTG
//
KV389606.1:subseq(44514,100272) GeneWise match 43708 65569 809.91 + . KV389606.1:subseq(44514,100272)-genewise-prediction-1
KV389606.1:subseq(44514,100272) GeneWise cds 43708 43779 0.00 + 0 KV389606.1:subseq(44514,100272)-genewise-prediction-1
KV389606.1:subseq(44514,100272) GeneWise intron 43780 44204 0.00 + . KV389606.1:subseq(44514,100272)-genewise-prediction-1
KV389606.1:subseq(44514,100272) GeneWise cds 44205 44313 0.00 + 0 KV389606.1:subseq(44514,100272)-genewise-prediction-1
KV389606.1:subseq(44514,100272) GeneWise intron 44314 46513 0.00 + . KV389606.1:subseq(44514,100272)-genewise-prediction-1
KV389606.1:subseq(44514,100272) GeneWise cds 46514 46588 0.00 + 2 KV389606.1:subseq(44514,100272)-genewise-prediction-1
KV389606.1:subseq(44514,100272) GeneWise intron 46589 50009 0.00 + . KV389606.1:subseq(44514,100272)-genewise-prediction-1
KV389606.1:subseq(44514,100272) GeneWise cds 50010 50272 0.00 + 2 KV389606.1:subseq(44514,100272)-genewise-prediction-1
KV389606.1:subseq(44514,100272) GeneWise intron 50273 51582 0.00 + . KV389606.1:subseq(44514,100272)-genewise-prediction-1
KV389606.1:subseq(44514,100272) GeneWise cds 51583 51691 0.00 + 0 KV389606.1:subseq(44514,100272)-genewise-prediction-1
KV389606.1:subseq(44514,100272) GeneWise intron 51692 59924 0.00 + . KV389606.1:subseq(44514,100272)-genewise-prediction-1
KV389606.1:subseq(44514,100272) GeneWise cds 59925 59973 0.00 + 2 KV389606.1:subseq(44514,100272)-genewise-prediction-1
KV389606.1:subseq(44514,100272) GeneWise intron 59974 61388 0.00 + . KV389606.1:subseq(44514,100272)-genewise-prediction-1
KV389606.1:subseq(44514,100272) GeneWise cds 61389 61569 0.00 + 1 KV389606.1:subseq(44514,100272)-genewise-prediction-1
KV389606.1:subseq(44514,100272) GeneWise intron 61570 62857 0.00 + . KV389606.1:subseq(44514,100272)-genewise-prediction-1
KV389606.1:subseq(44514,100272) GeneWise cds 62858 63040 0.00 + 0 KV389606.1:subseq(44514,100272)-genewise-prediction-1
KV389606.1:subseq(44514,100272) GeneWise intron 63041 65473 0.00 + . KV389606.1:subseq(44514,100272)-genewise-prediction-1
KV389606.1:subseq(44514,100272) GeneWise cds 65474 65569 0.00 + 0 KV389606.1:subseq(44514,100272)-genewise-prediction-1
//
genewise output
Score 25.49 bits over entire alignment
Scores as bits over a synchronous coding model
Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info
SPP00000359_2.0 309 LFLVVLVVNLGVSSYIESIILY
LF ++L+ L SSY+E IIL+
LFSILLIWTLEESSYVEKIILF
KV389606.1:sub-11193 cttattatacggattggaaact
ttcttttgctaagcataatttt
gttcagagaaaaccttgatttt
//
>KV389606.1:subseq(44514,100272).pep
LFSILLIWTLEESSYVEKIILF
//
>KV389606.1:subseq(44514,100272).[11193:11126].sp
CTGTTTTCTATCTTATTGATATGGACACTAGAAGAAAGCTCCTATGTTGAGAAAATTATT
CTTTTT
//
KV389606.1:subseq(44514,100272) GeneWise match 11193 11128 25.49 - . KV389606.1:subseq(44514,100272)-genewise-prediction-1
KV389606.1:subseq(44514,100272) GeneWise cds 11193 11128 0.00 - 0 KV389606.1:subseq(44514,100272)-genewise-prediction-1
//