genewise output
Score 17.17 bits over entire alignment
Scores as bits over a synchronous coding model
Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info
SPP00000326_2.0 97 VNGVRSH--PLLAFLTRSSVS
+ GV H PL++FLT S S
ITGVSHHARPLVSFLTHFSAS
KV389444.1:subs14695 aaggaccgcctgtttacttgt
tcgtgaacgcttcttcatccc
aacgccccgcagacgttcttg
//
>KV389444.1:subseq(8973590,100497).pep
ITGVSHHARPLVSFLTHFSAS
//
>KV389444.1:subseq(8973590,100497).[14695:14757].sp
ATAACAGGCGTGAGCCACCACGCCCGGCCCTTAGTGTCATTCTTGACTCATTTCTCTGCT
TCG
//
KV389444.1:subseq(8973590,100497) GeneWise match 14695 14757 18.17 + . KV389444.1:subseq(8973590,100497)-genewise-prediction-1
KV389444.1:subseq(8973590,100497) GeneWise cds 14695 14757 0.00 + 0 KV389444.1:subseq(8973590,100497)-genewise-prediction-1
//
genewise output
Score 237.83 bits over entire alignment
Scores as bits over a synchronous coding model
Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info
SPP00000326_2.0 2 LPMAGGEPVSLGSLWGKALLIKNVASLXGTTVRDYTQMNKLQWRLGPSD
LPMAGGEPV L SL GKALLIKNVASLXGTTVRDYTQMNKLQ RLGPSD
LPMAGGEPVILSSLRGKALLIKNVASLXGTTVRDYTQMNKLQRRLGPSD
KV389444.1:sub-50509 ccaggggcgacatccgagccaaaggtctgaagcgtacaaacccccgcag
tctcggactttgctggactttaatcctggcctgaacataataggtgcga
ccgccggtacaccggcgggtcgtggccaccgcgcccggcggggctgctc
SPP00000326_2.0 51 LVVLGFPCNQFGHQENTKKEEILNSLKYVQPRGGFQPNFSFFEKCEVNG
LVVLGFPCNQFGHQEN K EEILNSLKYV+P G FQPNFS+F K +VNG
LVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGEFQPNFSLFGKFQVNG
KV389444.1:sub-50362 cggcgtctactgccgagaaggacatcatgccgggtccattctgatcgag
ttttgtcgaatgaaaacaaaattactaatgcggatacatcttgatatag
gggcccgccgtgtggccgcagtgtcagccatttgcgcccgctggcgctt
SPP00000326_2.0 100 VRSHPLLAFLTR----------------SSVSLMCGNDVAWNFKKFLDG
+ HPL FL R S VSL+C N+VAWNFKKFLDG
AKLHPLFTFLRRPCQRPATTPRHSXPTWSPVSLVCCNNVAWNFKKFLDG
KV389444.1:sub-50215 gatccctatccactcccgaacccttcattcgtcgttaaggtataatcgg
catacttcttggcgagcccccgacgccgcctcttggaatcgataattag
aggctccccgggccacaaggagcaagcgtagtggtccttcgccggcgtc
SPP00000326_2.0 133 PAGAPVHRYSRASRPLTLRLTSK
P GAP++RYS ASRPLTLRLTSK
PTGAPIYRYSCASRPLTLRLTSK
KV389444.1:sub-50068 caggcatatatgtactatacata
ccgcctagaggccgctctgtcca
tctccacgccctcaagagggacg
//
>KV389444.1:subseq(8973590,100497).pep
LPMAGGEPVILSSLRGKALLIKNVASLXGTTVRDYTQMNKLQRRLGPSDLVVLGFPCNQF
GHQENAKNEEILNSLKYVRPGGEFQPNFSLFGKFQVNGAKLHPLFTFLRRPCQRPATTPR
HSXPTWSPVSLVCCNNVAWNFKKFLDGPTGAPIYRYSCASRPLTLRLTSK
//
>KV389444.1:subseq(8973590,100497).[50509:49998].sp
CTCCCCATGGCCGGCGGGGAGCCTGTAATCCTAAGCTCCCTGCGGGGCAAGGCGCTGCTT
ATCAAGAATGTGGCGTCCCTCTGAGGCACCACGGTCCGGGACTACACCCAGATGAACAAG
CTGCAGCGGCGCCTTGGGCCCAGTGACCTGGTGGTGCTCGGCTTCCCGTGCAACCAGTTT
GGGCATCAGGAGAACGCCAAGAACGAAGAGATTCTGAATTCCCTAAAGTACGTCCGACCT
GGTGGTGAGTTCCAGCCCAACTTCTCGCTCTTTGGGAAGTTCCAGGTCAATGGTGCAAAG
TTGCACCCTCTCTTCACCTTCCTGCGGAGGCCCTGCCAACGCCCAGCAACGACGCCACGG
CACTCATGACCGACCTGGTCTCCAGTGTCTCTGGTGTGTTGCAACAATGTTGCCTGGAAC
TTCAAGAAGTTCCTGGATGGCCCTACCGGTGCCCCCATATACAGGTACAGCTGCGCTTCC
AGACCATTGACATTGAGGCTGACATCCAAG
//
KV389444.1:subseq(8973590,100497) GeneWise match 50509 50000 273.66 - . KV389444.1:subseq(8973590,100497)-genewise-prediction-1
KV389444.1:subseq(8973590,100497) GeneWise cds 50509 50000 0.00 - 0 KV389444.1:subseq(8973590,100497)-genewise-prediction-1
//