Command line: [exonerate -m p2g --showtargetgff -q ./SPP00000356_2.0.fa -t ./SPP00000356_2.0/fastasubseq/KV390038.1_fastasubseq.fa]
Hostname: [ws101092U]

C4 Alignment:
------------
         Query: SPP00000356_2.0 # Protein # Selenoprotein K (SELENOK) # Marmoset 
        Target: KV390038.1:subseq(874322,100140) Cebus capucinus imitator isolate Cc_AM_T3 unplaced genomic scaffold Scaffold612, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 331
   Query range: 0 -> 91
  Target range: 49999 -> 50281

     1 : MetValTyrIleSerAsnGlyGlnValLeuAspSer<->SerGlnSerProTrpArgLeu :    19
         ||||||||||||||||||||||||||||||||||||   !:!||||||||||||||||||
         MetValTyrIleSerAsnGlyGlnValLeuAspSerArgAsnGlnSerProTrpArgLeu
 50000 : ATGGTTTACATCTCGAACGGACAGGTGTTGGACAGCCGGAATCAGTCTCCATGGAGATTA : 50057

    20 : ProLeuIleThrAspPhePheTrpGlyIleGlyGluPheMetValLeuPhePheLysThr :    39
          !!|||||||||||||||||||||||||||!.!||||||:::||||||||||||||||||
         SerLeuIleThrAspPhePheTrpGlyIleAlaGluPheValValLeuPhePheLysThr
 50058 : TCTTTGATAACAGATTTCTTCTGGGGAATAGCTgagtttgtggttttatttttcaaaacc : 50117

    40 : LeuLeuGlnGlnAspVal<->LysArgArgSerTyrGlySerSerProAspSerArg<-> :    58
         ||||||||||||||||||   ||||||||||||||||||!:!||| !!|||||||||   
         LeuLeuGlnGlnAspValLysLysArgArgSerTyrGlyAsnSerSerAspSerArgTyr
 50118 : ctGCTTCAGCAAgatgtgaaaaaaagaagaagctatGGAAACTCATCTGATTCCAGATAT : 50177

    59 : AspAspGlyGlyGlyProProGlyAsnLeuProGlnArgIleGlyArgMetSerHisPro :    77
         ||||||||| !!|||||||||||||||! !|||  !|||!!:||||||!!:!:!|||! !
         AspAspGlyArgGlyProProGlyAsnProPro***ArgMetGlyArgIleAsnHisLeu
 50178 : GATGATGGAAGAGGGCCACCAGGAAACCCTCCCTGAAGAATGGGTAGAATCAATCATCTG : 50237

    78 : CysGlyProSerProSerProValAlaSerGlyUnkGlyArg :    91
          !!|||||||||||| !!|||:!!|||.!!|||   ||||||
         ArgGlyProSerProProProMetAlaGlyGly***GlyArg
 50238 : CGTGGCCCCAGTCCTCCTCCAATGGCTGGTGGATGAGGAAGG : 50281

vulgar: SPP00000356_2.0 0 91 . KV390038.1:subseq(874322,100140) 49999 50281 + 331 M 12 36 G 0 3 M 33 99 G 0 3 M 12 36 G 0 3 M 34 102
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2016-11-18
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
KV390038.1:subseq(874322,100140)	exonerate:protein2genome:local	gene	50000	50281	331	+	.	gene_id 1 ; sequence SPP00000356_2.0 ; gene_orientation .
KV390038.1:subseq(874322,100140)	exonerate:protein2genome:local	cds	50000	50281	.	+	.	
KV390038.1:subseq(874322,100140)	exonerate:protein2genome:local	exon	50000	50281	.	+	.	insertions 9 ; deletions 0
KV390038.1:subseq(874322,100140)	exonerate:protein2genome:local	similarity	50000	50281	331	+	.	alignment_id 1 ; Query SPP00000356_2.0 ; Align 50000 1 36 ; Align 50039 13 99 ; Align 50141 46 36 ; Align 50180 58 102
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis