Command line: [exonerate -m p2g --showtargetgff -q ./SPP00000355_2.0.fa -t ./SPP00000355_2.0/fastasubseq/KV390038.1_fastasubseq.fa]
Hostname: [ws101092U]

C4 Alignment:
------------
         Query: SPP00000355_2.0 # Protein # Selenoprotein K (SELENOK) # Marmoset 
        Target: KV390038.1:subseq(874322,100272) Cebus capucinus imitator isolate Cc_AM_T3 unplaced genomic scaffold Scaffold612, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 267
   Query range: 0 -> 66
  Target range: 49999 -> 50200

     1 : MetValTyrLeuLeuAsnGlyGlnValLeuAspSerTrpSerProSerProTrpArgLeu :    20
         |||||||||:!!! !||||||||||||||||||||| !!!:!! !|||||||||||||||
         MetValTyrIleSerAsnGlyGlnValLeuAspSerArgAsnGlnSerProTrpArgLeu
 50000 : ATGGTTTACATCTCGAACGGACAGGTGTTGGACAGCCGGAATCAGTCTCCATGGAGATTA : 50057

    21 : SerTrpValThrGlyPhePheTrpGlyIleAlaGluPheValLeuLeu<->LeuLysThr :    39
         |||! !:!!|||! !|||||||||||||||||||||||||||:::|||   ...||||||
         SerLeuIleThrAspPhePheTrpGlyIleAlaGluPheValValLeuPhePheLysThr
 50058 : TCTTTGATAACAGATTTCTTCTGGGGAATAGCTgagtttgtggttttatttttcaaaacc : 50117

    40 : LeuLeuGlnGlnAspValLysLysArgSerSerTyrGlyAsnSerSerAspSerArgTyr :    59
         |||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||
         LeuLeuGlnGlnAspValLysLysArgArgSerTyrGlyAsnSerSerAspSerArgTyr
 50118 : ctGCTTCAGCAAgatgtgaaaaaaagaagaagctatGGAAACTCATCTGATTCCAGATAT : 50177

    60 : AspAspGluArgGlyProPro :    66
         ||||||! !||||||||||||
         AspAspGlyArgGlyProPro
 50178 : GATGATGGAAGAGGGCCACCA : 50200

vulgar: SPP00000355_2.0 0 66 . KV390038.1:subseq(874322,100272) 49999 50200 + 267 M 36 108 G 0 3 M 30 90
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2016-11-18
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
KV390038.1:subseq(874322,100272)	exonerate:protein2genome:local	gene	50000	50200	267	+	.	gene_id 1 ; sequence SPP00000355_2.0 ; gene_orientation .
KV390038.1:subseq(874322,100272)	exonerate:protein2genome:local	cds	50000	50200	.	+	.	
KV390038.1:subseq(874322,100272)	exonerate:protein2genome:local	exon	50000	50200	.	+	.	insertions 3 ; deletions 0
KV390038.1:subseq(874322,100272)	exonerate:protein2genome:local	similarity	50000	50200	267	+	.	alignment_id 1 ; Query SPP00000355_2.0 ; Align 50000 1 108 ; Align 50111 37 90
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis