Command line: [exonerate -m p2g --showtargetgff -q ./SPP00000351_2.0.fa -t ./SPP00000351_2.0/fastasubseq/KV390038.1_fastasubseq.fa]
Hostname: [ws101092U]

C4 Alignment:
------------
         Query: SPP00000351_2.0 # Protein # Selenoprotein K (SELENOK) # Marmoset 
        Target: KV390038.1:subseq(874322,100239) Cebus capucinus imitator isolate Cc_AM_T3 unplaced genomic scaffold Scaffold612, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 478
   Query range: 0 -> 94
  Target range: 49999 -> 50281

     1 : MetValTyrIleSerAsnGlyGlnValLeuAspSerArgAsnGlnSerProTrpArgLeu :    20
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         MetValTyrIleSerAsnGlyGlnValLeuAspSerArgAsnGlnSerProTrpArgLeu
 50000 : ATGGTTTACATCTCGAACGGACAGGTGTTGGACAGCCGGAATCAGTCTCCATGGAGATTA : 50057

    21 : SerLeuIleThrAspPhePheTrpGlyIleAlaGluPheValValLeuPhePheLysThr :    40
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         SerLeuIleThrAspPhePheTrpGlyIleAlaGluPheValValLeuPhePheLysThr
 50058 : TCTTTGATAACAGATTTCTTCTGGGGAATAGCTgagtttgtggttttatttttcaaaacc : 50117

    41 : LeuLeuGlnGlnAspValLysLysArgArgSerTyrGlyAsnSerSerAspSerArgTyr :    60
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         LeuLeuGlnGlnAspValLysLysArgArgSerTyrGlyAsnSerSerAspSerArgTyr
 50118 : ctGCTTCAGCAAgatgtgaaaaaaagaagaagctatGGAAACTCATCTGATTCCAGATAT : 50177

    61 : AspAspGlyArgGlyProSerGlyAsnProProArgArgMetGlyArgIleAsnHisLeu :    80
         |||||||||||||||||| !!|||||||||||| !!||||||||||||||||||||||||
         AspAspGlyArgGlyProProGlyAsnProPro***ArgMetGlyArgIleAsnHisLeu
 50178 : GATGATGGAAGAGGGCCACCAGGAAACCCTCCCTGAAGAATGGGTAGAATCAATCATCTG : 50237

    81 : HisGlyProSerProProProMetAlaGlyGlyUnkGlyArg :    94
         !.!||||||||||||||||||||||||||||||   ||||||
         ArgGlyProSerProProProMetAlaGlyGly***GlyArg
 50238 : CGTGGCCCCAGTCCTCCTCCAATGGCTGGTGGATGAGGAAGG : 50281

vulgar: SPP00000351_2.0 0 94 . KV390038.1:subseq(874322,100239) 49999 50281 + 478 M 94 282
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2016-11-18
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
KV390038.1:subseq(874322,100239)	exonerate:protein2genome:local	gene	50000	50281	478	+	.	gene_id 1 ; sequence SPP00000351_2.0 ; gene_orientation .
KV390038.1:subseq(874322,100239)	exonerate:protein2genome:local	cds	50000	50281	.	+	.	
KV390038.1:subseq(874322,100239)	exonerate:protein2genome:local	exon	50000	50281	.	+	.	insertions 0 ; deletions 0
KV390038.1:subseq(874322,100239)	exonerate:protein2genome:local	similarity	50000	50281	478	+	.	alignment_id 1 ; Query SPP00000351_2.0 ; Align 50000 1 282
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis