Command line: [exonerate -m p2g --showtargetgff -q ./SPP00000376_2.0.fa -t ./SPP00000376_2.0/fastasubseq/KV389434.1_fastasubseq.fa]
Hostname: [ws101092U]
C4 Alignment:
------------
Query: SPP00000376_2.0 # Protein # Thioredoxin reductase 1 (TXNRD1) # Marmoset
Target: KV389434.1:subseq(1333459,100236) Cebus capucinus imitator isolate Cc_AM_T3 unplaced genomic scaffold Scaffold8, whole genome shotgun sequence
Model: protein2genome:local
Raw score: 2677
Query range: 100 -> 655
Target range: 14405 -> 72655
101 : ThrGluAspValArgAlaLeuGluGlyAlaLeuLeuGluLeuAlaAlaGluThrAspLeu : 120
|||||||||! !|||||||||||||||||||||! !||||||||||||||||||||||||
ThrGluAspGlyArgAlaLeuGluGlyAlaLeuSerGluLeuAlaAlaGluThrAspLeu
14406 : ACAGAGGACGGTCGGGCCCTGGAAGGAGCGCTCTCGGAATTGGCCGCGGAAACCGACCTG : 14463
121 : ProIleValPheValLysGlnArgLysIleGlyGlyHisGlyProThrLeuLys >>>> : 139
|||:!!||||||||||||||||||||||||||||||!.!|||||||||||||||
ProValValPheValLysGlnArgLysIleGlyGlyArgGlyProThrLeuLys++
14464 : CCAGTTGTGTTTGTGAAACAGAGAAAGATAGGCGGCCGTGGTCCAACCTTGAAGgt.... : 14522
140 : Target Intron 1 >>>> AlaHisGlnGluGlyArgLeuGlnLysLeuLeuLysM : 151
23180 bp |||:!!|||||||||||||||||||||||||||||||
++AlaTyrGlnGluGlyArgLeuGlnLysLeuLeuLysM
14523 : .....................aggcTTATCAGGAGGGCAGACTTCAAAAGCTACTAAAAA : 37736
152 : etAsnGlyProGluAspLeuProGluSerCysAspTyrAspTyrAspLeuIleIleIleG : 171
||||||||||||||! !|||||||||||| |||||||||||||||||||||||||
etAsnGlyProGluGlyLeuProGluSer------TyrAspTyrAspLeuIleIleIleG
37737 : TGAACGGCCCTGAGGGTCTTCCCGAGTCC------TATGACTATGACCTTATCATCATTG : 37790
172 : lyGlyGlySerGlyGlyLeuAlaAlaAlaLysAlaArgLeuLeu >>>> Target In : 186
|||||||||||||||||||||||||||||||||||||||||||| 2690
lyGlyGlySerGlyGlyLeuAlaAlaAlaLysAlaArgLeuLeu++
37791 : GAGGTGGCTCTGGAGGCCTAGCAGCTGCTAAGGCAAGGCTCCTTgt.............. : 37837
187 : tron 2 >>>> GluAlaAlaGlnTyrGlyLysLysValMetValLeuAspPheValTh : 201
bp |||||||||||||||||||||||||||||||||||||||||||||||
++GluAlaAlaGlnTyrGlyLysLysValMetValLeuAspPheValTh
37838 : ...........aggaaGCAGCCCAATATGGCAAGAAGGTGATGGTCCTGGACTTTGTCAC : 40570
202 : rProThrProLeuGlyThrArgTrp{G} >>>> Target Intron 3 >>>> {ly : 210
|||||||||||||||||||||||||{|} 2327 bp {||
rProThrProLeuGlyThrArgTrp{G}++ ++{ly
40571 : TCCCACCCCTCTTGGAACTAGATGG{G}gt.........................ag{GT : 42925
211 : }LeuGlyGlyThrCysValAsnValGlyCysIleProLysLysLeuMetHisGlnAlaAl : 230
}|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
}LeuGlyGlyThrCysValAsnValGlyCysIleProLysLysLeuMetHisGlnAlaAl
42926 : }CTCGGAGGAACATGTGTGAATGTGGGTTGCATACCTAAAAAACTGATGCACCAAGCTGC : 42984
231 : aLeuLeuGlyGlnAlaLeuGlnAspSerArgAsnTyrGlyTrpLysValGluGluThr{V : 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||{|
aLeuLeuGlyGlnAlaLeuGlnAspSerArgAsnTyrGlyTrpLysValGluGluThr{V
42985 : TTTGTTAGGACAAGCCCTACAAGACTCTCGAAACTATGGATGGAAAGTCGAGGAGACA{G : 43044
251 : } >>>> Target Intron 4 >>>> {al}LysHisAspTrpAspArgMetIleGl : 259
} 3750 bp {||}||||||||||||||||||||||||||
}++ ++{al}LysHisAspTrpAspArgMetIleGl
43045 : }gt.........................ag{TT}AAGCATGATTGGGACAGAATGATAGA : 46821
260 : uAlaValGlnAsnHisIleGlySerLeuAsnTrpGlyTyrArgValAlaLeuArgGluLy : 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
uAlaValGlnAsnHisIleGlySerLeuAsnTrpGlyTyrArgValAlaLeuArgGluLy
46822 : AGCTGTACAGAATCACATTGGCTCTTTGAACTGGGGCTACCGGGTAGCTCTGCGGGAGAA : 46881
280 : sLysValValTyrGluAsnAlaTyrGlyGlnPheIleGlyProHisArgIleLys >>> : 298
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
sLysValValTyrGluAsnAlaTyrGlyGlnPheIleGlyProHisArgIleLys++
46882 : GAAAGTTGTCTATGAGAATGCTTATGGGCAATTTATTGGTCCTCACAGGATTAAGgt... : 46940
299 : > Target Intron 5 >>>> AlaThrAsnAsnLysGlyLysGluLysIleTyrSer : 309
487 bp ||||||||||||||||||||||||||||||||||||
++AlaThrAsnAsnLysGlyLysGluLysIleTyrSer
46941 : ......................agGCAACAAATaataaaggcaaagaaaagattTATTCA : 47458
310 : AlaGluArgPheLeuIleAlaThrGlyGluArgProArgTyrLeuGlyIleProGlyAsp : 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
AlaGluArgPheLeuIleAlaThrGlyGluArgProArgTyrLeuGlyIleProGlyAsp
47459 : GCAGAGAGATTTCTCATTGCCACTGGTGAAAGACCACGTTACTTGGGCATCCCTGGTGAC : 47518
330 : LysGluTyrCysIleSer{Se} >>>> Target Intron 6 >>>> {r}AspAsp : 338
||||||||||||||||||{||} 2464 bp {|}||||||
LysGluTyrCysIleSer{Se}++ ++{r}AspAsp
47519 : AAAGAATACTGCATCAGC{AG}gt.........................ag{T}GATGAT : 50009
339 : LeuPheSerLeuProTyrCysProGlyLysThrLeuIleValGlyAlaSerTyrValAla : 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
LeuPheSerLeuProTyrCysProGlyLysThrLeuIleValGlyAlaSerTyrValAla
50010 : CTTTTCTCCTTACCTTACTGCCCGGGGAAGACCCTCATCGTTGGAGCATCCTATGTTGCT : 50069
359 : LeuGluCysAlaGlyPheLeuAlaGlyIleGlyLeuAspValThrValMetValArgSer : 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
LeuGluCysAlaGlyPheLeuAlaGlyIleGlyLeuAspValThrValMetValArgSer
50070 : TTGGAATGTGCTGGATTTCTTGCTGGTATTGGTTTAGATGTCACTGTTATGGTTAGGTCC : 50129
379 : IleLeuLeuArgGlyPheAspGlnAspMetAlaAsnLysIleGlyGluHisMetGluGlu : 398
||||||||||||||||||||||||!!:|||||||||||||||||||||||||||||||||
IleLeuLeuArgGlyPheAspGlnGluMetAlaAsnLysIleGlyGluHisMetGluGlu
50130 : ATTCTTCTTAGAGGATTTGACCAGGAAATGGCCAACAAAATTGGTGAACACATGGAAGAA : 50189
399 : HisGlyIleLysPheIleArgGlnPheValProIleLys >>>> Target Intron : 412
||||||||||||||||||||||||||||||||||||||| 3063 bp
HisGlyIleLysPheIleArgGlnPheValProIleLys++
50190 : CATGGCATCAAGTTTATAAGACAGTTCGTACCAATTAAAgt................... : 50233
413 : 7 >>>> ValGluGlnIleGluAlaGlyThrProGlyArgLeuArgValValAlaGlnS : 429
||||||||||||||||||||||||||||||||||||||||||||||||||||
++ValGluGlnIleGluAlaGlyThrProGlyArgLeuArgValValAlaGlnS
50234 : ......agGTCGAACAAATTGAAGCAGGGACACCAGGCCGACTCCGAGTAGTAGCTCAGT : 53345
430 : erThrAsnAsnGluGluIleIleGluGlyGluTyrAsnThr >>>> Target Intro : 443
||||||||!:!|||||||||||||||||||||||||||||| 1185 bp
erThrAsnSerGluGluIleIleGluGlyGluTyrAsnThr++
53346 : CTACCAATAGTGAGGAAATCATTGAAGGAGAGTATAATACGgt................. : 53389
444 : n 8 >>>> ValLeuLeuAlaIleGlyArgAspAlaCysThrArgLysIleGlyLeuGl : 459
||||||||||||||||||||||||||||||||||||||||||||||||||
++ValLeuLeuAlaIleGlyArgAspAlaCysThrArgLysIleGlyLeuGl
53390 : ........agGTGTTGTTGGCAATAGGCAGAGATGCTTGCACAAGAAAAATTGGCTTAGA : 54620
460 : uThrValGlyValLysIleAsnGlu{Ly} >>>> Target Intron 9 >>>> {s : 468
|||||||||||||||||||||||||{||} 666 bp {|
uThrValGlyValLysIleAsnGlu{Ly}++ ++{s
54621 : AACTGTAGGGGTGAAGATAaatgaa{aa}gt.........................ag{G : 55315
469 : }ThrGlyLysIleProValThrAspGluGluGlnThrAsnValProTyrIleTyrAlaIl : 488
}|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
}ThrGlyLysIleProValThrAspGluGluGlnThrAsnValProTyrIleTyrAlaIl
55316 : }ACTGGAAAAATACCTGTCACAGATGAAGAGCAGACCAACGTGCCTTACATCTATGCCAT : 55373
489 : eGlyAspIleLeuGluGlyLysValGluLeuThrProValAlaIleGlnAlaGlyArgLe : 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
eGlyAspIleLeuGluGlyLysValGluLeuThrProValAlaIleGlnAlaGlyArgLe
55374 : TGGCGATATATTGGAGGGTAAGGTGGAGCTTACCCCAGTTGCAATccaggcaggaagatt : 55433
509 : uLeuAlaGlnArgLeuTyrAlaGlySerThrValLys >>>> Target Intron 10 : 521
||||||||||||||||||||||||||||||||||||| 526 bp
uLeuAlaGlnArgLeuTyrAlaGlySerThrValLys++
55434 : gctggcTCAGAGGCTCTATGCAGGTTCCACTGTTAAGgt..................... : 55474
522 : >>>> CysAspTyrGluAsnValProThrThrValPheThrProLeuGluTyrGlyAl : 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||
++CysAspTyrGluAsnValProThrThrValPheThrProLeuGluTyrGlyAl
55475 : .....agTGTGACTATGAAAATGTTCCGACCACTGTATTTACTCCTTTGGAATATGGAGC : 56049
539 : aCysGlyLeuSerGluGluLysAlaValGluLysPheGlyGluGluAsnIleGlu >>> : 557
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
aCysGlyLeuSerGluGluLysAlaValGluLysPheGlyGluGluAsnIleGlu++
56050 : TTGTGGCCTTTCTGAGGAGAAAGCTGTGGAGAAGTTTGGGGAAGAAAATATTGAGgt... : 56108
558 : > Target Intron 11 >>>> ValTyrHisSerTyrPheTrpProLeuGluTrpTh : 568
2158 bp |||||||||||||||||||||||||||||||||||
++ValTyrHisSerTyrPheTrpProLeuGluTrpTh
56109 : .......................aggtTTACCATAGTTACTTTTGGCCATTGGAATGGAC : 58297
569 : rIleProSerArgAspAsnAsnLysCysTyrAlaLysIleIleCysAsnThrLysAspSe : 588
|||||||||||||||||||||||||||||||||||||||||||||||||! !||||||!:
rIleProSerArgAspAsnAsnLysCysTyrAlaLysIleIleCysAsnIleLysAspAs
58298 : GATTCCATCAAGAGATAACAACAAATGTTATGCAAAAATAATCTGTAATATTAAAGACAA : 58357
589 : r >>>> Target Intron 12 >>>> GluArgValValGlyPheHisValLeuGl : 598
! 3938 bp |||||||||||||||||||||||||||||
n++ ++GluArgValValGlyPheHisValLeuGl
58358 : Tgt..........................aggaaCGTGTTGTGGGCTTTCACGTACTGGG : 62325
599 : yProAsnAlaGlyGluValThrGlnGlyPheAlaAlaAlaLeuLysCysGlyLeuThrLy : 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
yProAsnAlaGlyGluValThrGlnGlyPheAlaAlaAlaLeuLysCysGlyLeuThrLy
62326 : TCCAAATGCTGGAGAAGTTACACAAGGCTTCGCAGCTGCACTGAAATGTGGACTGACCAA : 62385
619 : sLysGlnLeuAspSerThrIleGlyIleHisProValCysAlaGlu >>>> Target : 634
|||||||||||||||||||||||||||||||||||||||||||||| 101
sLysGlnLeuAspSerThrIleGlyIleHisProValCysAlaGlu++
62386 : AAAACAGCTGGACAGCACAATTGGAATCCACCCTGTCTGTGCAGAGgt............ : 62435
635 : Intron 13 >>>> ValPheThrThrLeuSerValThrLysArgSerGlyAlaSerIl : 648
57 bp ||||||||||||||||||||||||||||||||||||||||||||
++ValPheThrThrLeuSerValThrLysArgSerGlyAlaSerIl
62436 : ..............agGTATTCACAACACTCTCTGTGACCAAACGCTCTGGGGCAAGCAT : 72632
649 : eLeuGlnAlaGlyCysUnkGly : 655
|||||||||||||||| |||
eLeuGlnAlaGlyCys***Gly
72633 : CCTGCAGGCTGGCTGCTGAGGT : 72655
vulgar: SPP00000376_2.0 100 655 . KV389434.1:subseq(1333459,100236) 14405 72655 + 2677 M 38 114 5 0 2 I 0 23176 3 0 2 M 22 66 G 2 0 M 23 69 5 0 2 I 0 2686 3 0 2 M 24 72 S 0 1 5 0 2 I 0 2323 3 0 2 S 1 2 M 39 117 S 0 1 5 0 2 I 0 3746 3 0 2 S 1 2 M 47 141 5 0 2 I 0 483 3 0 2 M 38 114 S 0 2 5 0 2 I 0 2460 3 0 2 S 1 1 M 75 225 5 0 2 I 0 3059 3 0 2 M 31 93 5 0 2 I 0 1181 3 0 2 M 25 75 S 0 2 5 0 2 I 0 662 3 0 2 S 1 1 M 52 156 5 0 2 I 0 522 3 0 2 M 36 108 5 0 2 I 0 2154 3 0 2 M 32 96 5 0 2 I 0 3934 3 0 2 M 45 135 5 0 2 I 0 10153 3 0 2 M 22 66
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2016-11-18
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local gene 14406 72655 2677 + . gene_id 1 ; sequence SPP00000376_2.0 ; gene_orientation +
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local cds 14406 14519 . + .
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local exon 14406 14519 . + . insertions 0 ; deletions 0
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice5 14520 14521 . + . intron_id 1 ; splice_site "GT"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local intron 14520 37699 . + . intron_id 1
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice3 37698 37699 . + . intron_id 0 ; splice_site "ag"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local cds 37700 37834 . + .
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local exon 37700 37834 . + . insertions 0 ; deletions 2
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice5 37835 37836 . + . intron_id 2 ; splice_site "GT"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local intron 37835 40524 . + . intron_id 2
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice3 40523 40524 . + . intron_id 1 ; splice_site "ag"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local cds 40525 40597 . + .
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local exon 40525 40597 . + . insertions 0 ; deletions 0
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice5 40598 40599 . + . intron_id 3 ; splice_site "GT"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local intron 40598 42924 . + . intron_id 3
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice3 42923 42924 . + . intron_id 2 ; splice_site "AG"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local cds 42925 43044 . + .
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local exon 42925 43044 . + . insertions 0 ; deletions 0
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice5 43045 43046 . + . intron_id 4 ; splice_site "GT"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local intron 43045 46794 . + . intron_id 4
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice3 46793 46794 . + . intron_id 3 ; splice_site "AG"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local cds 46795 46937 . + .
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local exon 46795 46937 . + . insertions 0 ; deletions 0
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice5 46938 46939 . + . intron_id 5 ; splice_site "GT"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local intron 46938 47424 . + . intron_id 5
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice3 47423 47424 . + . intron_id 4 ; splice_site "AG"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local cds 47425 47540 . + .
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local exon 47425 47540 . + . insertions 0 ; deletions 0
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice5 47541 47542 . + . intron_id 6 ; splice_site "GT"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local intron 47541 50004 . + . intron_id 6
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice3 50003 50004 . + . intron_id 5 ; splice_site "ag"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local cds 50005 50230 . + .
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local exon 50005 50230 . + . insertions 0 ; deletions 0
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice5 50231 50232 . + . intron_id 7 ; splice_site "GT"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local intron 50231 53293 . + . intron_id 7
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice3 53292 53293 . + . intron_id 6 ; splice_site "AG"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local cds 53294 53386 . + .
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local exon 53294 53386 . + . insertions 0 ; deletions 0
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice5 53387 53388 . + . intron_id 8 ; splice_site "GT"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local intron 53387 54571 . + . intron_id 8
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice3 54570 54571 . + . intron_id 7 ; splice_site "ag"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local cds 54572 54648 . + .
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local exon 54572 54648 . + . insertions 0 ; deletions 0
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice5 54649 54650 . + . intron_id 9 ; splice_site "gt"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local intron 54649 55314 . + . intron_id 9
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice3 55313 55314 . + . intron_id 8 ; splice_site "AG"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local cds 55315 55471 . + .
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local exon 55315 55471 . + . insertions 0 ; deletions 0
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice5 55472 55473 . + . intron_id 10 ; splice_site "GT"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local intron 55472 55997 . + . intron_id 10
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice3 55996 55997 . + . intron_id 9 ; splice_site "AG"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local cds 55998 56105 . + .
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local exon 55998 56105 . + . insertions 0 ; deletions 0
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice5 56106 56107 . + . intron_id 11 ; splice_site "gt"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local intron 56106 58263 . + . intron_id 11
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice3 58262 58263 . + . intron_id 10 ; splice_site "ag"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local cds 58264 58359 . + .
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local exon 58264 58359 . + . insertions 0 ; deletions 0
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice5 58360 58361 . + . intron_id 12 ; splice_site "GT"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local intron 58360 62297 . + . intron_id 12
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice3 62296 62297 . + . intron_id 11 ; splice_site "ag"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local cds 62298 62432 . + .
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local exon 62298 62432 . + . insertions 0 ; deletions 0
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice5 62433 62434 . + . intron_id 13 ; splice_site "GT"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local intron 62433 72589 . + . intron_id 13
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local splice3 72588 72589 . + . intron_id 12 ; splice_site "AG"
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local cds 72590 72655 . + .
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local exon 72590 72655 . + . insertions 0 ; deletions 0
KV389434.1:subseq(1333459,100236) exonerate:protein2genome:local similarity 14406 72655 2677 + . alignment_id 1 ; Query SPP00000376_2.0 ; Align 14406 101 114 ; Align 37700 139 66 ; Align 37766 163 69 ; Align 40525 186 72 ; Align 42927 211 117 ; Align 46797 251 141 ; Align 47425 298 114 ; Align 50006 337 225 ; Align 53294 412 93 ; Align 54572 443 75 ; Align 55316 469 156 ; Align 55998 521 108 ; Align 58264 557 96 ; Align 62298 589 135 ; Align 72590 634 66
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis