------- SECIS element -- id:1 -- grade:B ---- Chromosome = LOCP02000012.1:subseq_2937975,200000_ Strand = + Positions = 141871 - 141941 Found by: Infernal (score=11.85) Covels (score=9.17) Stem2 length = 10 Apical loop length = 13 Insertion in stem2 = 0, 0 Free Energy = -19.02 ..(((((((.......(((((((((((((((.................))))))))))))))).........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC--cuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc ...(({(((---....([[[((((((((((------.............))))))))))]]]).....-...)))}))... target CGAUUUGCC---AUCAGGAAAGCAUGCGCU------GCAGAGACAGCCAAGCGUAUGCUGGACAACCU-UUGGGCUAACAA **** **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = LOCP02000012.1:subseq_2937975,200000_ Strand = + Positions = 184408 - 184479 Found by: Infernal (score=11.8) Covels (score=2.15) Stem2 length = 8 Apical loop length = 11 Insertion in stem2 = 0, 0 Free Energy = -6.56 ..(((((((.........(((((((((((((((...............))))))))))))))).........))))))).. model uucggucaugcg--UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc ..(({(((((........([[{((((({[((.......--------....))]})))))}]]).....-..)))))})).. target GCUGAACUCUAUGUUUCAUGAUGGUUGAAUAUUAAGCC--------GAUUUGGCCAACUCGAAAUAUU-AAAGAGUAUGCC **** ^^ ****