------- SECIS element -- id:1 -- grade:B ---- Chromosome = LOCP02000064.1:subseq_1967739,200000_ Strand = - Positions = 37840 - 37754 Found by: Infernal (score=12.11) Stem2 length = 8 Apical loop length = 28 Insertion in stem2 = 1, 0 Free Energy = -14.78 ..(((((((........((((((((((.((............................)))))))))))).........))))))).. model uucggucaugcg-UuaAUGAcGgccug-gcccgAAAcCcuuuuuggggugg-------gccaggcCuGAUGuuu-uuucaugaccggc ..(((((((........([[(((((((.((............................)))))))))]]).....-...))))))).. target UCAGGGGAAGAGGUCCAUGAACUUGGAUGGAAAAAAAUUACAUCCUUGAUUUCACUAACCUCUAAGUGAAAUUUA-GUAUUUCCCUCU **** ^^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = LOCP02000064.1:subseq_1967739,200000_ Strand = - Positions = 50146 - 50062 Found by: Infernal (score=10.5) Covels (score=0.82) Stem2 length = 11 Apical loop length = 14 Insertion in stem2 = 1, 0 Free Energy = -19.59 ..(((((((..........((((((((((.(((((................)))))))))))))))...........))))))).. model uucggucaugcg---UuaAUGAcGgccug-gcccuAAAcC-cuuuuuggggcgggccaggcCuGAUGuu--u-uuucaugaccggc ...((((((..........([[{((((((.((({((..............))})))))))))}]]).......-...))))))... target UUUUCUCUAGAAACUUCUGGGAAGGAGCCUACUUGGAACUUCUGGAAGUACCUAGUGGCUCCAGAUGGAAAGG-UGGUAGAGGCUU **** ^^ ****