Command line: [exonerate --exhaustive yes -m p2g --showtargetgff -q eEFsec125.anole.fa -t eEFsec125.extraccio.KQ757173.1.fa]
Hostname: [ws112181u]

C4 Alignment:
------------
         Query: eEFsec125.anole
        Target: KQ757173.1:subseq(1113161,40644) Gekko japonicus isolate JY-2015 unplaced genomic scaffold scaffold69, whole genome shotgun sequence:[revcomp]
         Model: protein2genome:local
     Raw score: 1049
   Query range: 0 -> 215
  Target range: 20644 -> 10695

     1 : ValThrLysLysValLysSerMetGlnMetPheHisThrProValThrTyrAlaMetGln :    20
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         ValThrLysLysValLysSerMetGlnMetPheHisThrProValThrTyrAlaMetGln
 20644 : GTGACGAAGAAAGTCAAGTCCATGCAGATGTTCCATACTCCAGTGACATATGCCATGCAG : 20587

    21 : GlyAspArgValGlyIleCysValThrGlnPheAspProLysLeuLeuGluArgGlyLeu :    40
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         GlyAspArgValGlyIleCysValThrGlnPheAspProLysLeuLeuGluArgGlyLeu
 20586 : GGTGACAGGGTAGGCATCTGTGTCACCCAGTTTGATCCAAAGCTATTGGAACGTGGTCTC : 20527

    41 : IleCysThrProGluSerLeuGlnThrIleHisAlaAlaIleIleSerLeuLysLysIle :    60
         |||||||||||||||||||||||||||||||||||||||||||||||||||!..||||||
         IleCysThrProGluSerLeuGlnThrIleHisAlaAlaIleIleSerLeuSerLysIle
 20526 : ATATGTACACCTGAATCTCTTCAGACAATTCATGCTGCTATAATCTCTTTAAGCAAAATC : 20467

    61 : ProTyrPheArgGlyThrLeuGlnThrLysAlaLysPheHisIleThrLeuGlyTyrGlu :    80
         ||||||||||||||||||||||||||||||||||||||||||||||||:!!|||:!!|||
         ProTyrPheArgGlyThrLeuGlnThrLysAlaLysPheHisIleThrValGlyHisGlu
 20466 : CCATATTTCCGAGGCACTCTTCAGACCAAAGCAAAGTTTCACATCACGGTTGGTCATGAA : 20407

    81 : ThrValMetGlyLysValMetPhePheSerProAlaProAspAspPheAsnAsnGluPro :   100
         ||||||||||||!:!||||||||||||||||||||||||||||||||||||!!.||||||
         ThrValMetGlyArgValMetPhePheSerProAlaProAspAspPheAsnLysGluPro
 20406 : ACTGTTATGGGAAGAGTAATGTTCTTCAGCCCGGCTCCAGATGACTTCAACAAAGAACCC : 20347

   101 : MetGluAsnSerLeuAspPheGlyLysGluTyrLeuTyrGlnGluGluTyrLeuTrpArg :   120
         :!!||||||......||||||   ||||||||||||||||||||||||||||||!  !:!
         LeuGluAsnAspPheAspPheLysLysGluTyrLeuTyrGlnGluGluTyrLeuSerLys
 20346 : CTGGAGAAcgattttgattttaaaaaagaatatcttTATCAAGAGGAGTATCTTTCCAAA : 20287

   121 : AspProLysSerSerGluGluAsnLysGluAsnAspGlnThrGlyGluArgGlnIlePro :   140
         ||| !!||| !!||||||||||||||||||||||||||||||||||||||||||:!!|||
         AspSerLysProSerGluGluAsnLysGluAsnAspGlnThrGlyGluArgGlnLeuPro
 20286 : GACTCAAAACCGTCAGAGGAAAACAAGGAGAATGACCAAACTGGGGAAAGACAGCTCCCA : 20227

   141 : LysGlnGlnTrpAlaLeuLeuGluPheGluLysProValThrCysProLysLeuCysLeu :   160
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         LysGlnGlnTrpAlaLeuLeuGluPheGluLysProValThrCysProLysLeuCysLeu
 20226 : AAACAACAGTGGGCCTTACTGGAGTTTGAAAAACCAGTTACTTGTCCTAAGTTGTGTCTT : 20167

   161 : ValIleGlySerLysLeuAspThrAspIleHisAlaAsnThrCysArgLeuAlaPheHis :   180
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         ValIleGlySerLysLeuAspThrAspIleHisAlaAsnThrCysArgLeuAlaPheHis
 20166 : GTAATTGGTTCGAAGCTGGATACAGATATTCATGCAAACACATGCAGATTGGCATTTCAT : 20107

   181 : GlyValLeuLeuGlnGlyIleGluAspLysAsnTyrAlaGluThrPheLeuProLysLeu :   200
         |||:!!||||||:!!|||!!:|||||||||||||||  !||||||! !||||||||||||
         GlyIleLeuLeuGluGlyMetGluAspLysAsnTyrIleGluThrCysLeuProLysLeu
 20106 : GGGATACTGCTGGAAGGGATGGAAGACAAAAATTATATAGAAACGTGTCTTCCAAAGCTG : 20047

   201 : LysValTyrLysLeuLysHisLysGluGlyGlnValGluArg  >>>> Target Intr :   215
         ||||||||||||||||||||||||!!:|||||||||||||||           9304 bp
         LysValTyrLysLeuLysHisLysAspGlyGlnValGluArg++                
 20046 : AAAGTTTACAAGCTGAAACATAAGGATGGACAAGTAGAACGGgt................ : 20000

   216 : on 1 >>>>  Val :   215
                    |||
                  ++Val
 19999 : .........aggtA : 10696

vulgar: eEFsec125.anole 0 215 . KQ757173.1:subseq(1113161,40644) 20644 10695 - 1049 M 214 642 5 0 2 I 0 9300 3 0 2 M 1 3
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2016-11-11
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
KQ757173.1:subseq(1113161,40644)	exonerate:protein2genome:local	gene	10696	20644	1049	-	.	gene_id 1 ; sequence eEFsec125.anole ; gene_orientation +
KQ757173.1:subseq(1113161,40644)	exonerate:protein2genome:local	cds	20003	20644	.	-	.	
KQ757173.1:subseq(1113161,40644)	exonerate:protein2genome:local	exon	20003	20644	.	-	.	insertions 0 ; deletions 0
KQ757173.1:subseq(1113161,40644)	exonerate:protein2genome:local	splice5	20001	20002	.	-	.	intron_id 1 ; splice_site "GT"
KQ757173.1:subseq(1113161,40644)	exonerate:protein2genome:local	intron	10699	20002	.	-	.	intron_id 1
KQ757173.1:subseq(1113161,40644)	exonerate:protein2genome:local	splice3	10699	10700	.	-	.	intron_id 0 ; splice_site "ag"
KQ757173.1:subseq(1113161,40644)	exonerate:protein2genome:local	cds	10696	10698	.	-	.	
KQ757173.1:subseq(1113161,40644)	exonerate:protein2genome:local	exon	10696	10698	.	-	.	insertions 0 ; deletions 0
KQ757173.1:subseq(1113161,40644)	exonerate:protein2genome:local	similarity	10696	20644	1049	-	.	alignment_id 1 ; Query eEFsec125.anole ; Align 20645 1 642 ; Align 10699 215 3
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis