Command line: [exonerate --exhaustive yes -m p2g --showtargetgff -q GPx96.anole.fa -t GPx96.extraccio.KQ747955.1.fa]
Hostname: [ws101065u]

C4 Alignment:
------------
         Query: GPx96.Anole 
        Target: KQ747955.1:subseq(1117660,44417) Gekko japonicus isolate JY-2015 unplaced genomic scaffold scaffold298, whole genome shotgun sequence:[revcomp]
         Model: protein2genome:local
     Raw score: 855
   Query range: 0 -> 193
  Target range: 24486 -> 19999

     1 : AlaGluAlaMetAlaGlyLeuProValArgGlyLeuAlaGlyLeuLeuAlaArgProLeu :    20
         :!!|||  !||||||! !! ! !!:!!  !||||||!.!|||:!!:!!!.!|||||||||
         SerGluArgMetAlaValSerSerLeuSerGlyLeuGlyGlyValMetValArgProLeu
 24486 : TCTGAGAGAATGGCTGTGTCGTCGCTGTCTGGACTAGGGGGCGTGATGGTGCGGCCGCTA : 24429

    21 : GlyAlaLysAspProValAspLeuGlySerPheAlaGlyArgValValLeuValSerAsn :    40
         ||||||  !!!:|||||||||||||||||||||  !||||||||||||||||||||||||
         GlyAlaAlaGluProValAspLeuGlySerPheLeuGlyArgValValLeuValSerAsn
 24428 : GGCGCTGCGGAGCCCGTAGATTTGGGCTCGTTTCTGGGGCGGGTGGTACTGGTTTCCAAT : 24369

    41 : ValAlaSerLeuUnkGlyThrThrAlaArgAspPheThrGlnPheSerGluLeuGlnArg :    60
         ||||||||||||   |||||||||::!||||||||||||||||||  !||||||||||||
         ValAlaSerLeu***GlyThrThrSerArgAspPheThrGlnPheHisGluLeuGlnArg
 24368 : GTGGCCTCGCTTTGAGGCACCACGAGCCGGGACTTCACCCAGTTCCACGAGCTGCAGCGG : 24309

    61 : ArgPheGlyProArgGlyPheValValLeuAlaPheProCysAsnGlnPheGlyHisGln :    80
         |||||||||||||||||||||..!||||||||||||||||||||||||||||||||||||
         ArgPheGlyProArgGlyPheThrValLeuAlaPheProCysAsnGlnPheGlyHisGln
 24308 : CGCTTTGGGCCCCGCGGGTTTACGGTGCTCGCCTTCCCATGCAACCAGTTCGGCCACCAG : 24249

    81 :   >>>> Target Intron 1 >>>>  GluAsnAlaThrAsnGluGluIleLeuAsnS :    91
                    3908 bp           |||||||||||||||||||||||||||||||
         ++                         ++GluAsnAlaThrAsnGluGluIleLeuAsnS
 24248 : gt.........................agGAAAATGCTACCAATGAAGAGATCCTGAATT : 20308

    92 : erLeuLysTyrValArgProGlyAsnGlyTyrGluProAsnPheThrValPheGluLysC :   111
         ||||||||!:!||||||||||||||||||||||||||||||||| !!||||||!!:||||
         erLeuLysPheValArgProGlyAsnGlyTyrGluProAsnPheProValPheAspLysC
 20307 : CATTGAAGTTTGTCCGCCCAGGCAATGGGTATGAGCCTAACTTCCCTGTGTTTGATAAGT : 20248

   112 : ysGluValAsnGlyGluAsnAlaHisProLeuPheLysPheLeuLysAspGluLeuProT :   131
         ||||||||||||||! !|||.!!||||||||||||!:!|||||||||!!:! !||||||!
         ysGluValAsnGlyAlaAsnThrHisProLeuPheArgPheLeuLysGluAlaLeuProP
 20247 : GTGAGGTGAATGGAGCAAATACACACCCACTTTTCAGATTCTTGAAGGAAGCATTGCCTT : 20188

   132 : yrProHisAspAspAlaValSerLeuMetAlaAsnProGlnAsnIleIleTrpSerProV :   151
         :!||||||||||||  !||||||||||||.!!|||||||||  !||||||||||||||||
         heProHisAspAspGlnValSerLeuMetThrAsnProGlnCysIleIleTrpSerProV
 20187 : TCCCACATGATGACCAGGTATCACTCATGACCAACCCACAGTGCATCATCTGGTCTCCTG : 20128

   152 : alCysArgAsnAspIleSerTrpAsnPheGluLysPheLeuIleGlyProAspGlyLysP :   171
         |||||||||||||||||:!!||||||||||||||||||||||||||||||||||||  !|
         alCysArgAsnAspIleAlaTrpAsnPheGluLysPheLeuIleGlyProAspGlyValP
 20127 : TGTGCCGCAATGACATCGCATGGAATTTTGAGAAGTTCCTTATCGGTCCTGATGGTGTGC : 20068

   172 : roPheLysArgTyrSerArgArgPheGluThrIleLysIleGlnAspAspIleGluLysL :   191
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         roPheLysArgTyrSerArgArgPheGluThrIleLysIleGlnAspAspIleGluLysL
 20067 : CTTTCAAACGATACAGCAGGCGGTTCGAAACTATCAAGATCCAGGATGATATTGAAAAGC : 20008

   192 : euLeuGln :   193
         ||||||||
         euLeuGln
 20007 : TTCTTCAG : 20000

vulgar: GPx96.Anole 0 193 . KQ747955.1:subseq(1117660,44417) 24486 19999 - 855 M 80 240 5 0 2 I 0 3904 3 0 2 M 113 339
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2016-11-11
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
KQ747955.1:subseq(1117660,44417)	exonerate:protein2genome:local	gene	20000	24486	855	-	.	gene_id 1 ; sequence GPx96.Anole ; gene_orientation +
KQ747955.1:subseq(1117660,44417)	exonerate:protein2genome:local	cds	24247	24486	.	-	.	
KQ747955.1:subseq(1117660,44417)	exonerate:protein2genome:local	exon	24247	24486	.	-	.	insertions 0 ; deletions 0
KQ747955.1:subseq(1117660,44417)	exonerate:protein2genome:local	splice5	24245	24246	.	-	.	intron_id 1 ; splice_site "GT"
KQ747955.1:subseq(1117660,44417)	exonerate:protein2genome:local	intron	20339	24246	.	-	.	intron_id 1
KQ747955.1:subseq(1117660,44417)	exonerate:protein2genome:local	splice3	20339	20340	.	-	.	intron_id 0 ; splice_site "AG"
KQ747955.1:subseq(1117660,44417)	exonerate:protein2genome:local	cds	20000	20338	.	-	.	
KQ747955.1:subseq(1117660,44417)	exonerate:protein2genome:local	exon	20000	20338	.	-	.	insertions 0 ; deletions 0
KQ747955.1:subseq(1117660,44417)	exonerate:protein2genome:local	similarity	20000	24486	855	-	.	alignment_id 1 ; Query GPx96.Anole ; Align 24487 1 240 ; Align 20339 81 339
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis