Command line: [exonerate --exhaustive yes -m p2g --showtargetgff -q GPx8_anole.fa -t GPx8extraccio2.fa]
Hostname: [ws112663u]

C4 Alignment:
------------
         Query: SPP00000199_2.0 # Protein # Glutathione peroxidase 8 (GPx8) # Anole lizard 
        Target: KQ755496.1:subseq(3561,25931) Gekko japonicus isolate JY-2015 unplaced genomic scaffold scaffold1079, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 415
   Query range: 0 -> 131
  Target range: 1348 -> 15931

     1 : Lys  >>>> Target Intron 1 >>>>  AlaSerLeuValValAsnValAlaSerH :    11
         |||           8645 bp           !.!||||||||||||||||||||||||.
         Lys++                         ++ValSerLeuValValAsnValAlaSerG
  1349 : aaGgt.........................agGTGTCCTTAGTTGTTAATGTTGCAAGTG : 10024

    12 : isCysGlnHisThrAspLysSerTyrValMetLeuGlnGluLeuHisArgGluPheGlyS :    31
         !.|||   :!!||||||!..  !|||  !   ||||||:!!|||!!.||||||.!.||||
         luCysGlyTyrThrAspSerHisTyrLysAlaLeuGlnGlnLeuGlnArgGluLeuGlyS
 10025 : AGTGCGGCTATACTGACAGCCATTACAAAGCCCTACAGCAGCTACAGCGAGAACTGGGCT : 10084

    32 : erThrHisPheThrValLeuAlaPheProCysAsnGlnTyrGlyGluSerGluProGlyT :    51
         ||  !||||||!.!||||||||||||||||||||||||!:!|||:!!..!||||||! !!
         erTyrHisPheAsnValLeuAlaPheProCysAsnGlnPheGlyGlnGlnGluProAspS
 10085 : CATATCATTTTAATGTCCTCGCATTCCCATGTAATCAGTTTGGGCAGCAGGAACCAGATA : 10144

    52 : hrIleGlnGluIleThrTyrPheAlaLysSerAsnTyrGlyValSerPheProIlePheA :    71
         :!! !:!!||||||  !  !||||||::!!.!!..||||||||||||||||||!!:|||!
         erAsnLysGluIleGluSerPheAlaArgLysThrTyrGlyValSerPheProMetPheS
 10145 : GCAACAAAGAAATTGAGAGTTTTGCTCGAAAAACATATGGAGTCTCTTTCCCCATGTTCA : 10204

    72 : snLysIleLysIleLeuGlyThrGluAlaSerProAlaPheLysPheLeuIle{G}  >> :    89
         :!||||||  !:!:  !||||||!  |||!:!||||||||||||!:!|||:!!{|}    
         erLysIleAlaValLysGlyThrGlyAlaAsnProAlaPheLysTyrLeuVal{G}++  
 10205 : GCAAAATTGCAGTGAAGGGCACTGGTGCGAATCCAGCCTTCAAATATCTAGTT{G}gt.. : 10261

    90 : >> Target Intron 2 >>>>  {lu}SerSerLysLysGluProLysTrpAsnPheT :   100
                5545 bp           {||}|||!!!   :!!||||||!  ||||||||||
                                ++{lu}SerThrGlyGluGluProThrTrpAsnPheT
 10262 : .......................ag{AA}TCCACTGGTGAGGAGCCAACCTGGAACTTTT : 15836

   101 : rpLysTyrLeuValSerProGluGlyLysValValLysPheTrpArgProGluGluProI :   120
         ||||||||||||||..!|||...|||!!.|||||||||  !|||  ! !!   !   !!|
         rpLysTyrLeuValAspProSerGlyAsnValValLysAlaTrpAspSerThrValThrI
 15837 : GGAAGTACTTGGTAGATCCCAGTGGAAATGTGGTAAAGGCTTGGGATTCTACCGTCACTA : 15896

   121 : leGluAsnIleLysProAspIleAlaAlaLeuVal :   131
         |||||.!.|||||||||..!:!!.!!! !||||||
         leGluGluIleLysProSerValThrGluLeuVal
 15897 : TTGAAGAAATAAAACCTTCTGTTACTGAGCTTGTC : 15931

vulgar: SPP00000199_2.0 0 131 . KQ755496.1:subseq(3561,25931) 1348 15931 + 415 M 1 3 5 0 2 I 0 8641 3 0 2 M 87 261 S 0 1 5 0 2 I 0 5541 3 0 2 S 1 2 M 42 126
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2016-11-04
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
KQ755496.1:subseq(3561,25931)	exonerate:protein2genome:local	gene	1349	15931	415	+	.	gene_id 1 ; sequence SPP00000199_2.0 ; gene_orientation +
KQ755496.1:subseq(3561,25931)	exonerate:protein2genome:local	cds	1349	1351	.	+	.	
KQ755496.1:subseq(3561,25931)	exonerate:protein2genome:local	exon	1349	1351	.	+	.	insertions 0 ; deletions 0
KQ755496.1:subseq(3561,25931)	exonerate:protein2genome:local	splice5	1352	1353	.	+	.	intron_id 1 ; splice_site "GT"
KQ755496.1:subseq(3561,25931)	exonerate:protein2genome:local	intron	1352	9996	.	+	.	intron_id 1
KQ755496.1:subseq(3561,25931)	exonerate:protein2genome:local	splice3	9995	9996	.	+	.	intron_id 0 ; splice_site "AG"
KQ755496.1:subseq(3561,25931)	exonerate:protein2genome:local	cds	9997	10258	.	+	.	
KQ755496.1:subseq(3561,25931)	exonerate:protein2genome:local	exon	9997	10258	.	+	.	insertions 0 ; deletions 0
KQ755496.1:subseq(3561,25931)	exonerate:protein2genome:local	splice5	10259	10260	.	+	.	intron_id 2 ; splice_site "GT"
KQ755496.1:subseq(3561,25931)	exonerate:protein2genome:local	intron	10259	15803	.	+	.	intron_id 2
KQ755496.1:subseq(3561,25931)	exonerate:protein2genome:local	splice3	15802	15803	.	+	.	intron_id 1 ; splice_site "AG"
KQ755496.1:subseq(3561,25931)	exonerate:protein2genome:local	cds	15804	15931	.	+	.	
KQ755496.1:subseq(3561,25931)	exonerate:protein2genome:local	exon	15804	15931	.	+	.	insertions 0 ; deletions 0
KQ755496.1:subseq(3561,25931)	exonerate:protein2genome:local	similarity	1349	15931	415	+	.	alignment_id 1 ; Query SPP00000199_2.0 ; Align 1349 1 3 ; Align 9997 2 261 ; Align 15806 90 126
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis