Command line: [exonerate -m p2g --showtargetgff -q PSTK.fa -t genomic.fa]
Hostname: [ws116076U]

C4 Alignment:
------------
         Query: SPP00000052_2.0 # Protein # Phosphoseryl-tRNA kinase  (PSTK) # Human 
        Target: CM004426.1:subseq(1260000,150000) Ictalurus punctatus breed USDA103 chromosome 13, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 102
   Query range: 145 -> 169
  Target range: 6019 -> 6091

  146 : LeuPheLeuValLeuAspAspAsnPheTyrTyrGlnSerMetArgTyrGluValTyrGlnLe :  166
        |||  !|||:!!|||||||||||||||||||||!!.||||||||||||! !|||||||||||
        LeuAlaLeuLeuLeuAspAspAsnPheTyrTyrHisSerMetArgTyrGlyValTyrGlnLe
 6020 : CTCGCCCTGCTGCTCGACGACAACTTCTACTACCACAGCATGAGATACGGAGTGTACCAGCT : 6080

  167 : uAlaArgLys :  169
        ||||||||||
        uAlaArgLys
 6081 : CGCCCGGAAA : 6091

vulgar: SPP00000052_2.0 145 169 . CM004426.1:subseq(1260000,150000) 6019 6091 + 102 M 24 72
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2016-11-25
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
CM004426.1:subseq(1260000,150000)	exonerate:protein2genome:local	gene	6020	6091	102	+	.	gene_id 1 ; sequence SPP00000052_2.0 ; gene_orientation .
CM004426.1:subseq(1260000,150000)	exonerate:protein2genome:local	cds	6020	6091	.	+	.	
CM004426.1:subseq(1260000,150000)	exonerate:protein2genome:local	exon	6020	6091	.	+	.	insertions 0 ; deletions 0
CM004426.1:subseq(1260000,150000)	exonerate:protein2genome:local	similarity	6020	6091	102	+	.	alignment_id 1 ; Query SPP00000052_2.0 ; Align 6020 146 72
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis