Protein prediction
Predicted by: exonerate Blastx evalue: 1e-41
Query protein: gi|941786220|ref|XP_014325199.1| PREDICTED: redox-regulatory protein FAM213A-like [Xiphophorus maculatus]
Positions on query: 1-212 Query length: 212

Target name: KQ557215.1:subseq_14600000,100000_
Positions on target: 69721-69865,70325-70416,70500-70640,70912-71076,71180-71272 Strand: +
Has a Redox Box!


  Query   MGMWSLGIGAVGAALAGIFLANTDMCLPKGASASLEHLEDADLRSTTDD <---Intron---> GKVIK
          ||||||||||||||||||||||||||||||||||||||||||||||||| <   459bp    > |||||
  Target  MGMWSLGIGAVGAALAGIFLANTDMCLPKGASASLEHLEDADLRSTTDD                GKVIK
          agattcgaggggggcggatcgaagatccaggagtcgccggggcctaagg                gagaa
          tgtgctgtgctgcctcgtttcacatgtcagcgcctaataacatgccca                agatta
          ggggcgccttcagcgtgccgcctcgtttatacagggccacctgtccac                tggtaa
                                                                                
  
  Query   AKSLWEKNGAVVMAVRRPGUFLCRE <---Intron---> EASELSSLKPQLEELGVPLVAVVKENVGS
          ||||||||||||||||||||||||| <    83bp    > |||||||||||||||||||||||||||||
  Target  AKSLWEKNGAVVMAVRRPGUFLCRE                EASELSSLKPQLEELGVPLVAVVKENVGS
          gaactgaaggggaggcccgttttag                ggtgcttcacccggcggccggggagaggt
          cagtgaaagctttctggcggttgga                accatcctacataatgtcttcttaaatgc
          ggcggggtaggcgcaggtaatgcag                gctggctggcggagcgctgtcggagccca
                             *                                                  
  
  Query   EIQDFRPHFAGDIYVDEM <---Intron---> KHFYGPLQRKMGGLGFIRLGVWQNFIRAWRSGYQGN
          |||||||||||||||||| <   271bp    > ||||||||||||||||||||||||||||||||||||
  Target  EIQDFRPHFAGDIYVDEM                KHFYGPLQRKMGGLGFIRLGVWQNFIRAWRSGYQGN
          gacgtacctgggatggga                acttgcccaaaggcgtaccggtcatacgtatgtcga
          ataatgcatcgatataat                aatagctagatggtgttgtgtgaattgcggcgaaga
          gcgccagcctgcccatgg                atctaaggaggagacccgtggggcttgcggttcatc
                                                                                
  
  Query   MLGEGFILGGVFVIGPGDQ <---Intron---> GILLEHKEKQFGDKVDTADVLKAAQKIVPVK
          ||||||||||||||||||| <   103bp    > |||||||||||||||||||||||||||||||
  Target  MLGEGFILGGVFVIGPGDQ                GILLEHKEKQFGDKVDTADVLKAAQKIVPVK
          acgggtatgggtgagcggc                gaccgcagactggaggagggcaggcaagcga
          ttgagtttggttttgcgaa                gtttaaaaaatgaataccattaccaattcta
          gctgcccgaagtccaaatg                accggcagggtccggcaaccaggagattaga