Selenoprotein id: 1         Category: known selenoprotein
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Protein prediction
Predicted by: exonerate Blastx evalue: 2e-34
Query protein: gi|941790705|ref|XP_014325867.1| PREDICTED: uncharacterized protein LOC102218877 [Xiphophorus maculatus]
Positions on query: 1-312 Query length: 312

Target name: KQ557207.1:subseq_1626543,105500_
Positions on target: 50000-50105,50486-50564,50656-50709,50879-50924,51992-52119,52208-52316,52451-52573,52836-52973,55402-55554 Strand: +


  Query   MAEDVTVSEETLTGALSLLVSLGQILLQNAQQEAAA <---Intron---> SLQTFVPHKITTLFGLIT
          |||||||||||||||||||||||||||||||||||| <   380bp    > ||||||||||||||||||
  Target  MAEDVTVSEETLTGALSLLVSLGQILLQNAQQEAAA                SLQTFVPHKITTLFGLIT
          aggggagtggataggtactgatgcatccagccgggg                tccatgccaaaattgtaa
          tcaatctcaactcgctgtttgtgatttaacaaacc                cctacttcaatccttgttc
          gggtgctaggtactcgtggctgtaaacgtcggaaa                atggtttttgcttattgca
                                                                                
  
  Query   AGENFYRR <---Intron---> IGVKTKGEAEAVWQKLYH <---Intron---> HPAVREQVEELL
          |||/|||| <    91bp    > ||||||||||||| |||| <   169bp    > ||||||||||||
  Target  AGEHFYRR                IGVKTKGEAEAVWLKLYH                HPAVREQVEELL
          gggcttaa                aggaaaggggggtcattc                ccggagcgggcc
          cgaatagg                tgtacagacactgtataa                acctgaataatt
          cgatcca                ataagaataagttgtaac                ctaacagaaagtg
                                                                                
  
  Query   KLE <---Intron---> NEWDSFLQSVDKDLQTTDEQLSGAKPADSLSPDSVFTDARSKE <---Int
          ||| <   1067bp   > ||||||||||||||| ||||||||||||||||||||||||||| <    88
  Target  KLE                NEWDSFLQSVDKDLQMTDEQLSGAKPADSLSPDSVFTDARSKE        
          acg                agtgttccaggagtcaaggcctggacggatacgtgtaggctag        
          ata                aagacttagtaaatatcaaatcgcaccagtgcacttcacgcaa        
          agg                tggcccggcgcatgggttggaaaagaaccatcctacttaaaa         
                                                                                
  
  Query   ron---> SVTLGQFLGQKLLLVLIGNFGWLPURDHVAELETNQ <---Intron---> TLLEAQSVRV
          bp    > |||||||||||||||||||||||||||||||||||| <   134bp    > ||||||||||
  Target          SVTLGQFLGQKLLLVLIGNFGWLPURDHVAELETNQ                TLLEAQSVRV
                  agacgcttgcacccgcagatgtcctcgcgggcgaac                accggctgcg
                  gtctgattgaattttttgatggtcggaatcatacaa                cttacactgt
                 gtgtgtgcgtgggggtctattaggaagctgcgggctg                ccggcgaggc
                                          *                                     
  
  Query   MVVSFGSVEGAQLWLEQTGCTFEMLLDSQKK <---Intron---> VYLSFGLGSSFSKVLKFSCLMQL
          ||||||||||||||||||||||||||||||| <   262bp    > || |||||||||||||| |||||
  Target  MVVSFGSVEGAQLWLEQTGCTFEMLLDSQKK                VYRSFGLGSSFSKVLKFGCLMQL
          aggttgaggggcctcgcagtatgaccgtcaa                gtcatgcgttttagtatgtcact
          tttctggtagcatgtaacggctatttacaaa                taggtgtgcctcattatggttat
          ggtccctggatggggagaatccagggtaaag                ccgttgtcccccggggcccgggg
                                                                                
  
  Query   SEFSAADRDFPDFPHRLLEDIFQ <---Intron---> LGGDFLLDETGKVLLSHPSKNPLDRPSLKDV
          |||||||||||||||||||||/| <   2428bp   > |||||||||||||||||||||||||||||||
  Target  SEFSAADRDFPDFPHRLLEDIYQ                LGGDFLLDETGKVLLSHPSKNPLDRPSLKDV
          tgtagggagtcgtcccccggatc                cgggttcggagagcctcctaaccgacatagg
          catgccagatcatcagttaataa                tggatttaacgatttcaccaactagcgtaat
          agcctacaccttcatcggacttg                gcgttagcagaggtcttgtactgcagtgacc
                                                                                
  
  Query   LQAAEDDSTSSYEDKNEQKP
          ||||||| ||||||||||||
  Target  LQAAEDDYTSSYEDKNEQKP
          ccgggggtaaatggaagcac
          taccaaaacggaaaaaaaac
          gactgtccccctatataaga