TBLASTN 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: /export/cursos/20428/BI/genomes/2016/Manis_javanica/genome.fa 80,669 sequences; 2,547,379,330 total letters Query= SPP00000141_2.0 # Protein # Thioredoxin reductase 3 (TXNRD3) # Human Length=698 Score E Sequences producing significant alignments: (Bits) Value JSZB01000602.1 Manis javanica isolate MP_PG03-UM SCAFFOLD674, w... 154 1e-36 JSZB01004433.1 Manis javanica isolate MP_PG03-UM SCAFFOLD5032, ... 142 7e-33 JSZB01007020.1 Manis javanica isolate MP_PG03-UM SCAFFOLD8069, ... 125 3e-27 JSZB01010522.1 Manis javanica isolate MP_PG03-UM SCAFFOLD12354,... 95.5 4e-18 JSZB01015288.1 Manis javanica isolate MP_PG03-UM SCAFFOLD18446,... 81.6 8e-14 JSZB01018391.1 Manis javanica isolate MP_PG03-UM SCAFFOLD22589,... 49.3 7e-04 JSZB01001722.1 Manis javanica isolate MP_PG03-UM SCAFFOLD1911, ... 48.1 0.002 JSZB01010380.1 Manis javanica isolate MP_PG03-UM SCAFFOLD12184,... 39.7 0.59 JSZB01020934.1 Manis javanica isolate MP_PG03-UM SCAFFOLD26129,... 38.5 1.3 JSZB01061420.1 Manis javanica isolate MP_PG03-UM SCAFFOLD97828,... 38.1 1.5 > JSZB01000602.1 Manis javanica isolate MP_PG03-UM SCAFFOLD674, whole genome shotgun sequence Length=164803 Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 75/98 (77%), Positives = 84/98 (86%), Gaps = 0/98 (0%) Frame = +1 Query 379 SDDLFSLPYCPGKTLVVGASYVALECAGFLAGFGLDVTVMVRSILLRGFDQEMAEKVGSY 438 SDDLFSLPYCPGKTLVVGASYVALECAGFLAG GLDVT+MVRSILLRGFDQEMAEKVGSY Sbjct 143617 SDDLFSLPYCPGKTLVVGASYVALECAGFLAGLGLDVTIMVRSILLRGFDQEMAEKVGSY 143796 Query 439 MEQHGVKFLRKFIPVMVQQLEKGSPGKLKVLAKSTEGT 476 MEQ+GVKF+RKF+PVMV + S +L+ + + T Sbjct 143797 MEQYGVKFIRKFVPVMVSLNDIWSSFYFILLSLAFDFT 143910 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 41/48 (85%), Positives = 46/48 (96%), Gaps = 0/48 (0%) Frame = +3 Query 293 VRHNWETMTKAIQNHISSLNWGYRLSLREKAVAYVNSYGEFVEHHKIK 340 V+HNWETMT+AIQNHI SLNW YRLSLREK+VAY+NSYGEFVEHHK+K Sbjct 141087 VKHNWETMTEAIQNHIGSLNWSYRLSLREKSVAYINSYGEFVEHHKLK 141230 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 44/56 (79%), Positives = 50/56 (89%), Gaps = 0/56 (0%) Frame = +2 Query 509 NEKSGKIPVNDVEQTNVPYVYAVGDILEDKPELTPVAIQSGKLLAQRLFGASLEKC 564 + +SGKIPVND+EQTNVPYVYA+GDILE K ELTPVAIQ+GKLLA+RLFG LEK Sbjct 150641 SNRSGKIPVNDMEQTNVPYVYAIGDILEGKIELTPVAIQAGKLLARRLFGGRLEKV 150808 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 39/40 (98%), Positives = 39/40 (98%), Gaps = 0/40 (0%) Frame = +2 Query 253 GLGGTCVNVGCIPKKLMHQAALLGQALCDSRKFGWEYNQQ 292 GLGGTCVNVGCIPKKLMHQAALLGQAL DSRKFGWEYNQQ Sbjct 136283 GLGGTCVNVGCIPKKLMHQAALLGQALTDSRKFGWEYNQQ 136402 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/44 (82%), Positives = 39/44 (89%), Gaps = 0/44 (0%) Frame = +2 Query 151 LELDQVDDGARVQEVLSEITNQKTVPNIFVNKVHVGGCDQTFQA 194 L ++ DDGA VQEVLSEITNQ+TVPNIFVNKVHVGGCDQTFQ Sbjct 132353 LIVNSSDDGANVQEVLSEITNQRTVPNIFVNKVHVGGCDQTFQV 132484 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/58 (69%), Positives = 42/58 (72%), Gaps = 8/58 (14%) Frame = +1 Query 339 IKATNKKGQETYYTAAQFVIATGERPRYLGIQGDKEYCITSDD--------LFSLPYC 388 KATN+KGQET YTAA+FVIATGERPRYLGI GDKEYCIT D LF P C Sbjct 142771 FKATNRKGQETCYTAAKFVIATGERPRYLGIPGDKEYCITR*D*IDCFNCKLFLFPVC 142944 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/50 (70%), Positives = 42/50 (84%), Gaps = 2/50 (4%) Frame = +3 Query 553 AQRLFGASLE--KCDYINVPTTVFTPLEYGCCGLSEEKAIEVYKKENLEI 600 ++ G SL +CDY +VPTTVFTPLEYGCCGLSEEKAIE+Y+KENLE+ Sbjct 154071 CHKIRGCSLFIFQCDYTSVPTTVFTPLEYGCCGLSEEKAIEMYQKENLEV 154220 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 27/36 (75%), Positives = 32/36 (89%), Gaps = 0/36 (0%) Frame = +2 Query 598 LEIYHTLFWPLEWTVAGRENNTCYAKIICNKFDHDR 633 +++HTLFWPLEWTVAGR+NNTCY KIICNK D+ R Sbjct 162338 FQVFHTLFWPLEWTVAGRDNNTCYTKIICNKSDNVR 162445 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/37 (84%), Positives = 33/37 (89%), Gaps = 0/37 (0%) Frame = +3 Query 452 PVMVQQLEKGSPGKLKVLAKSTEGTETIEGVYNTVLL 488 P VQQLEKGSPGKLKV+AKSTEG ET+EGVYNTV L Sbjct 144954 PY*VQQLEKGSPGKLKVVAKSTEGPETMEGVYNTVSL 145064 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/25 (100%), Positives = 25/25 (100%), Gaps = 0/25 (0%) Frame = +2 Query 229 EAAILGKKVMVLDFVVPSPQGTSWG 253 EAAILGKKVMVLDFVVPSPQGTSWG Sbjct 134555 EAAILGKKVMVLDFVVPSPQGTSWG 134629 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/26 (92%), Positives = 26/26 (100%), Gaps = 0/26 (0%) Frame = +2 Query 486 VLLAIGRDSCTRKIGLEKIGVKINEK 511 VLLA+GRDSCTRKIGLEKIGVKINE+ Sbjct 150002 VLLAVGRDSCTRKIGLEKIGVKINEQ 150079 Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust. Identities = 19/21 (90%), Positives = 21/21 (100%), Gaps = 0/21 (0%) Frame = +1 Query 136 RVKELFSSLGVECNVLELDQV 156 +VKELFSSLGVECNVLELD+V Sbjct 131008 QVKELFSSLGVECNVLELDRV 131070 Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/35 (77%), Positives = 34/35 (97%), Gaps = 0/35 (0%) Frame = +2 Query 194 AYQSGLLQKLLQEDLAYDYDliiigggsgglsCAK 228 A+QSGLLQKLLQED +YD+DLI++GGGSGGL+CA+ Sbjct 134207 AHQSGLLQKLLQEDTSYDFDLIVLGGGSGGLACAQ 134311 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 14/17 (82%), Positives = 17/17 (100%), Gaps = 0/17 (0%) Frame = +1 Query 121 SRVVIFSKSYCPHSTRV 137 +RV++FSKSYCPHSTRV Sbjct 113461 NRVMVFSKSYCPHSTRV 113511 > JSZB01004433.1 Manis javanica isolate MP_PG03-UM SCAFFOLD5032, whole genome shotgun sequence Length=1300580 Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 66/83 (80%), Positives = 75/83 (90%), Gaps = 0/83 (0%) Frame = -2 Query 379 SDDLFSLPYCPGKTLVVGASYVALECAGFLAGFGLDVTVMVRSILLRGFDQEMAEKVGSY 438 SDDLFSLPYCPGKTLVVGASYVALECAGFLAG GLDVTVMVRSILLRGFDQ+MA K+G + Sbjct 406894 SDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEH 406715 Query 439 MEQHGVKFLRKFIPVMVQQLEKG 461 ME+HGVKF+++F+P+ V L G Sbjct 406714 MEEHGVKFIKEFVPIKVSGLPVG 406646 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 38/46 (83%), Positives = 42/46 (91%), Gaps = 0/46 (0%) Frame = -3 Query 632 DRVIGFHILGPNAGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCGEV 677 +RV+GFH+LGPNAGEVTQGFAAA+KCGLTKQ LD TIGIHP C EV Sbjct 389379 ERVVGFHVLGPNAGEVTQGFAAAVKCGLTKQQLDSTIGIHPVCAEV 389242 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/59 (66%), Positives = 47/59 (80%), Gaps = 0/59 (0%) Frame = -3 Query 511 KSGKIPVNDVEQTNVPYVYAVGDILEDKPELTPVAIQSGKLLAQRLFGASLEKCDYINV 569 ++GKIPV D EQTNVPY+YA+GDILE K ELTPVAIQ+G+LLAQRL+ S K + V Sbjct 401421 RTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYAGSTVKVSVVAV 401245 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 36/77 (47%), Positives = 51/77 (66%), Gaps = 0/77 (0%) Frame = -1 Query 289 YNQQVRHNWETMTKAIQNHISSLNWGYRLSLREKAVAYVNSYGEFVEHHKIKATNKKGQE 348 ++ V+H+WE MT+A+QNHI SLNWGYR++LREK V Y N+YGEFV H+IK + + Sbjct 408938 FSCAVKHDWEKMTEAVQNHIGSLNWGYRVALREKKVTYENAYGEFVGPHRIKVIV*QPEC 408759 Query 349 TYYTAAQFVIATGERPR 365 + + + GE R Sbjct 408758 LCFVCLKLCLGAGEEKR 408708 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/39 (82%), Positives = 34/39 (87%), Gaps = 0/39 (0%) Frame = -1 Query 253 GLGGTCVNVGCIPKKLMHQAALLGQALCDSRKFGWEYNQ 291 GLGGTCVNVGCIPKKLMHQAALLGQAL DSR +GW + Sbjct 412742 GLGGTCVNVGCIPKKLMHQAALLGQALQDSRTYGWNIGE 412626 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/57 (58%), Positives = 44/57 (77%), Gaps = 1/57 (2%) Frame = -1 Query 550 KLLAQRLFGASLEKCDYINVPTTVFTPLEYGCCGLSEEKAIEVYKKENLEIYHTLFW 606 + L LF +S ++CDY NVPTTVFTPLEYG CGLSEEKA+E + +EN+E+ +T + Sbjct 395285 RFLMS*LF-SSTKQCDYENVPTTVFTPLEYGSCGLSEEKAVEKFGEENIEVSYTFHY 395118 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/38 (68%), Positives = 32/38 (84%), Gaps = 0/38 (0%) Frame = -2 Query 341 ATNKKGQETYYTAAQFVIATGERPRYLGIQGDKEYCIT 378 TN KG+E Y+A +F+IATGERPRYLGI GD+EYCI+ Sbjct 408400 TTNNKGKEKIYSAERFLIATGERPRYLGIPGDREYCIS 408287 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 19/29 (66%), Positives = 24/29 (83%), Gaps = 0/29 (0%) Frame = -2 Query 599 EIYHTLFWPLEWTVAGRENNTCYAKIICN 627 +IYH+ FWPLEW + R+NN CYAKI+CN Sbjct 394237 QIYHSYFWPLEWAIPSRDNNKCYAKIVCN 394151 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/26 (88%), Positives = 25/26 (96%), Gaps = 0/26 (0%) Frame = -3 Query 486 VLLAIGRDSCTRKIGLEKIGVKINEK 511 VLLAIGRD+CTRKIGLE +GVKINEK Sbjct 403617 VLLAIGRDACTRKIGLETVGVKINEK 403540 Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust. Identities = 22/39 (56%), Positives = 31/39 (79%), Gaps = 1/39 (3%) Frame = -1 Query 449 KFIPVM-VQQLEKGSPGKLKVLAKSTEGTETIEGVYNTV 486 KF ++ V+Q+E G+PG+L+V+A+ST ETIEG YNTV Sbjct 404321 KFYQLL*VEQIEAGTPGRLRVVAQSTSSGETIEGEYNTV 404205 Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust. Identities = 17/26 (65%), Positives = 20/26 (77%), Gaps = 0/26 (0%) Frame = -2 Query 228 KEAAILGKKVMVLDFVVPSPQGTSWG 253 +EAA KKV+VLDFV P+P GT WG Sbjct 415648 QEAAKYNKKVLVLDFVTPTPLGTRWG 415571 > JSZB01007020.1 Manis javanica isolate MP_PG03-UM SCAFFOLD8069, whole genome shotgun sequence Length=615252 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 110/188 (59%), Gaps = 9/188 (5%) Frame = +2 Query 500 GLEKIGVKINEKSGKIPVNDVEQTNVPYVYAVGDILEDKPELTPVAIQSGKLLAQRLFGA 559 L K+G++ ++K G I V++ + TNV +YAVGD+ + LTPVAI +G+ LA RLF Sbjct 214469 NLNKLGIQTDDK-GHILVDEFQNTNVKGIYAVGDVC-GRALLTPVAIAAGRKLAHRLFEY 214642 Query 560 SLE-KCDYINVPTTVFTPLEYGCCGLSEEKAIEVYKKENLEIYHTLFWPLEWTV-----A 613 + K DY N+PT VF+ G GL+E++AI Y KEN++IY T F P+ V Sbjct 214643 KEDSKLDYDNIPTVVFSHPPIGTVGLTEDEAIYKYGKENVKIYSTTFTPMYHAVTKRKTK 214822 Query 614 GRENNTCYAKIICNKFDHDRVIGFHILGPNAGEVTQGFAAAMKCGLTKQLLDDTIGIHPT 673 + C K++C ++V+G H+ G ++ QGFA A+K G TK D+T+ IHPT Sbjct 214823 XKRKTKCVMKMVCVD-KEEKVVGIHMQGIACDKMLQGFAIAVKTGATKADFDNTVAIHPT 214999 Query 674 CGEVFTTL 681 E TL Sbjct 215000 SSEELVTL 215023 > JSZB01010522.1 Manis javanica isolate MP_PG03-UM SCAFFOLD12354, whole genome shotgun sequence Length=168235 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 44/46 (96%), Positives = 46/46 (100%), Gaps = 0/46 (0%) Frame = +2 Query 632 DRVIGFHILGPNAGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCGEV 677 +RVIGFHILGP+AGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCGEV Sbjct 6722 NRVIGFHILGPSAGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCGEV 6859 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 16/24 (67%), Positives = 21/24 (88%), Gaps = 0/24 (0%) Frame = +2 Query 675 GEVFTTLEITKSSGLDITQKGCXG 698 G++ T+L+ITK+SG DITQKGC G Sbjct 7064 GQILTSLDITKASGRDITQKGC*G 7135 > JSZB01015288.1 Manis javanica isolate MP_PG03-UM SCAFFOLD18446, whole genome shotgun sequence Length=753688 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 35/55 (64%), Positives = 41/55 (75%), Gaps = 0/55 (0%) Frame = -2 Query 243 VVPSPQGTSWGLGGTCVNVGCIPKKLMHQAALLGQALCDSRKFGWEYNQQVRHNW 297 +P GT+WGLGGTCVNVGCIPKKLMHQAALLG + D+ +GWE Q H+W Sbjct 572499 ALPHAPGTTWGLGGTCVNVGCIPKKLMHQAALLGTMIRDAPHYGWELAQPTPHSW 572335 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 24/30 (80%), Positives = 26/30 (87%), Gaps = 0/30 (0%) Frame = -1 Query 400 VALECAGFLAGFGLDVTVMVRSILLRGFDQ 429 VALECAGFL G GLD T+M+RSI LRGFDQ Sbjct 557392 VALECAGFLTGLGLDTTIMMRSIPLRGFDQ 557303 Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 21/34 (62%), Positives = 27/34 (79%), Gaps = 0/34 (0%) Frame = -1 Query 567 INVPTTVFTPLEYGCCGLSEEKAIEVYKKENLEI 600 VPTTVFTPLEYGC GLSEE A+ + +E++E+ Sbjct 542008 FQVPTTVFTPLEYGCVGLSEEAAVARHGQEHVEV 541907 Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 0/45 (0%) Frame = -3 Query 654 AMKCGLTKQLLDDTIGIHPTCGEVFTTLEITKSSGLDITQKGCXG 698 A +CG + Q + T+GIHPTC E L I+K SGLD T GC G Sbjct 538418 ACRCGTSYQQVMRTVGIHPTCAEEVAKLRISKRSGLDPTVTGC*G 538284 Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 0/38 (0%) Frame = -1 Query 619 TCYAKIICNKFDHDRVIGFHILGPNAGEVTQGFAAAMK 656 T + +++C + V+G H LGPNAGEVTQGFA +K Sbjct 540190 TVWFQMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIK 540077 Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust. Identities = 30/94 (32%), Positives = 48/94 (51%), Gaps = 6/94 (6%) Frame = -2 Query 406 GFLAGFGLDV-TVMVRSILLRGFDQEMAEKVGSYMEQHGVKFLRKFIPVMVQQLEKGSPG 464 G G DV T S ++ Q+M+ V +M HG +FLR IP+ V +L G Sbjct 555420 GLFPTLGSDVLTAAWPSHVVLVLLQQMSSLVTEHMAAHGTRFLRGCIPLRVGRLPD---G 555250 Query 465 KLKVLAKSTEGTETIEGVYNTVLLAIGRDS--CT 496 +L+V + ++ G ++TVL A+G+ + CT Sbjct 555249 QLQVTWEDLTASKENTGTFDTVLWAVGKGAQLCT 555148 Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust. Identities = 21/53 (40%), Positives = 31/53 (58%), Gaps = 0/53 (0%) Frame = -1 Query 487 LLAIGRDSCTRKIGLEKIGVKINEKSGKIPVNDVEQTNVPYVYAVGDILEDKP 539 L GR T + LEK GV + S K+ V+ E T+VP+++A+GD+ E P Sbjct 545185 LFPSGRAPETGSLALEKAGVSTDPHSQKVLVDAQEATSVPHIFAIGDVAEVWP 545027 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 22/45 (49%), Positives = 27/45 (60%), Gaps = 0/45 (0%) Frame = -3 Query 525 VPYVYAVGDILEDKPELTPVAIQSGKLLAQRLFGASLEKCDYINV 569 VP V + +PELTP A+ +GKLLAQRL S + DY NV Sbjct 542429 VPK*PGVPSSCQGRPELTPTAVMAGKLLAQRLCHQSSDLMDYDNV 542295 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 13/27 (48%), Positives = 21/27 (78%), Gaps = 0/27 (0%) Frame = -1 Query 296 NWETMTKAIQNHISSLNWGYRLSLREK 322 N M +A+QNH+ SLNWG+R+ L+++ Sbjct 571819 NRRKMAEAVQNHVKSLNWGHRVQLQDR 571739 > JSZB01018391.1 Manis javanica isolate MP_PG03-UM SCAFFOLD22589, whole genome shotgun sequence Length=19364 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 0/53 (0%) Frame = +2 Query 629 FDHDRVIGFHILGPNAGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCGEVFTTL 681 F +V+G H+ G E+ QGFA A+K G TK D+T+ IHPT E TL Sbjct 11936 FFFSQVVGIHMQGIGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTL 12094 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 22/49 (45%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = +1 Query 544 VAIQSGKLLAQRLFGASLE-KCDYINVPTTVFTPLEYGCCGLSEEKAIE 591 VAI +G+ LA RLF + K DY N+PT VF+ G GL+E K ++ Sbjct 8632 VAIAAGRKLAHRLFEYKEDSKLDYDNIPTVVFSHPPIGTVGLTEGKYLK 8778 > JSZB01001722.1 Manis javanica isolate MP_PG03-UM SCAFFOLD1911, whole genome shotgun sequence Length=155662 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/58 (40%), Positives = 37/58 (64%), Gaps = 0/58 (0%) Frame = +3 Query 118 IERSRVVIFSKSYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTV 175 I + VVIFSK+ C + T K LF + V V+ELD ++ G++ Q+ L ++T ++TV Sbjct 83544 ISNNCVVIFSKTSCSYCTMAKNLFHDMNVNYEVVELDMLEYGSQFQDALYKMTGERTV 83717 > JSZB01010380.1 Manis javanica isolate MP_PG03-UM SCAFFOLD12184, whole genome shotgun sequence Length=408890 Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (5%) Frame = -2 Query 118 IERSRVVIFSKSYCPHSTRVKELFSSLGVECNVLELDQV---DDGARVQEVLSEITNQKT 174 I+ +VV+F K CP+ R +EL S L + LE + D ++Q+ L ++T KT Sbjct 127171 IQPGKVVVFIKPTCPYCIRTQELLSQLPFKQGCLEFVDITATSDTKKIQDYLGQLTGAKT 126992 Query 175 V 175 V Sbjct 126991 V 126989 > JSZB01020934.1 Manis javanica isolate MP_PG03-UM SCAFFOLD26129, whole genome shotgun sequence Length=45746 Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/43 (42%), Positives = 31/43 (72%), Gaps = 1/43 (2%) Frame = -1 Query 484 NTVLLAIGRDSCTRKIGLEKIGVKINEKSGKIPVNDVEQTNVP 526 + +L+ IGR T+ +GLE++G++++ K G+IPVN QT +P Sbjct 37646 DVLLVCIGRRPFTQNLGLEELGIELDPK-GRIPVNTRFQTKIP 37521 > JSZB01061420.1 Manis javanica isolate MP_PG03-UM SCAFFOLD97828, whole genome shotgun sequence Length=2593 Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust. Identities = 15/24 (63%), Positives = 20/24 (83%), Gaps = 0/24 (0%) Frame = -3 Query 254 LGGTCVNVGCIPKKLMHQAALLGQ 277 LGGTCVNVGC+P K+M +AA + + Sbjct 206 LGGTCVNVGCVPSKIMIRAAHIAR 135 Lambda K H a alpha 0.319 0.137 0.411 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 469276707760 Database: /export/cursos/20428/BI/genomes/2016/Manis_javanica/genome.fa Posted date: Oct 21, 2016 4:42 PM Number of letters in database: 2,547,379,330 Number of sequences in database: 80,669 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40