------- SECIS element -- id:1 -- grade:A ----
 Chromosome = JSZB01015288.1:subseq_490000,135000_ Strand = - Positions = 47027 - 46954
 Found by:  Infernal (score=36.63) Covels (score=33.98)
 Stem2 length = 9   Apical loop length = 15   Insertion in stem2 = 0, 0
 Free Energy = -20.36

         ..(((((((.......(((((((((((((((...............)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..((((((((--....([[{((({(({((((...............))))}))})))}]])..--...))))))))..
 target  CCGAUGCCAG--ACAAUGACGACCUGCGCAGAAACCCACCUGUGGGCUGCCCAUGUCUGAGCC--CGACUGGCAUUUC
                         ****           ^^^                       ****                 

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = JSZB01015288.1:subseq_490000,135000_ Strand = - Positions = 4894 - 4814
 Found by:  Infernal (score=13.14) Covels (score=9.06)
 Stem2 length = 10   Apical loop length = 19   Insertion in stem2 = 0, 0
 Free Energy = -5.55

         ..(((((((.......(((((((((((((((...................)))))))))))))))..........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC----cuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc
         ..((({(((.--....{[[{(((((({((((...................))))}))))))}]]}......-...)))})))..
 target  UGGUUGUGAC--AACAUGAUGGGUUUGUUCUCAGCAGUUCUGAGAAAACAAGAGGAGACCUUGAUUUCAUC-ACCUCAGAGUGA
                         ****                                         ****                   

------- SECIS element -- id:3 -- grade:B ----
 Chromosome = JSZB01015288.1:subseq_490000,135000_ Strand = - Positions = 110647 - 110573
 Found by:  Infernal (score=11.08) Covels (score=0.37)
 Stem2 length = 11   Apical loop length = 18   Insertion in stem2 = 0, 0
 Free Energy = -21.27

         ..(((((((.......(((((((((((((((..................)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC---cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ...((({((.--....([[((((((((((((..................))))))))))))]])----....))})))...
 target  CAGGCUCACU--ACAGUGAUUUUGCACAGUGAGCCGGUCCCACCUGAGCCGCUGUGCAGAGGAA----CAGUGUCAGCAGG
                         ****             ^^                         ****