TBLASTN 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: /export/cursos/20428/BI/genomes/2016/Manis_javanica/genome.fa 80,669 sequences; 2,547,379,330 total letters Query= SPP00000129_2.0 # Protein # Thioredoxin reductase 1 (TXNRD1) # Human Length=649 Score E Sequences producing significant alignments: (Bits) Value JSZB01004433.1 Manis javanica isolate MP_PG03-UM SCAFFOLD5032, ... 160 1e-38 JSZB01000602.1 Manis javanica isolate MP_PG03-UM SCAFFOLD674, w... 144 2e-33 JSZB01007020.1 Manis javanica isolate MP_PG03-UM SCAFFOLD8069, ... 128 2e-28 JSZB01010522.1 Manis javanica isolate MP_PG03-UM SCAFFOLD12354,... 82.4 5e-14 JSZB01015288.1 Manis javanica isolate MP_PG03-UM SCAFFOLD18446,... 81.6 7e-14 JSZB01018391.1 Manis javanica isolate MP_PG03-UM SCAFFOLD22589,... 49.3 6e-04 JSZB01001722.1 Manis javanica isolate MP_PG03-UM SCAFFOLD1911, ... 48.9 9e-04 JSZB01061420.1 Manis javanica isolate MP_PG03-UM SCAFFOLD97828,... 40.8 0.22 JSZB01020934.1 Manis javanica isolate MP_PG03-UM SCAFFOLD26129,... 38.1 1.7 > JSZB01004433.1 Manis javanica isolate MP_PG03-UM SCAFFOLD5032, whole genome shotgun sequence Length=1300580 Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 79/94 (84%), Positives = 83/94 (88%), Gaps = 4/94 (4%) Frame = -2 Query 330 SDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEH 389 SDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEH Sbjct 406894 SDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEH 406715 Query 390 MEEHGIKFIRQFVPIKVEQIEAG----TPGRLRV 419 MEEHG+KFI++FVPIKV + G GR RV Sbjct 406714 MEEHGVKFIKEFVPIKVSGLPVGLLIILKGRRRV 406613 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 50/55 (91%), Positives = 52/55 (95%), Gaps = 0/55 (0%) Frame = -3 Query 462 KTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCD 516 +TGKIPVTDEEQTNVPYIYAIGDILE K+ELTPVAIQAGRLLAQRLYAGSTVK Sbjct 401421 RTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYAGSTVKVS 401257 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 45/74 (61%), Positives = 54/74 (73%), Gaps = 0/74 (0%) Frame = -1 Query 243 TVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIY 302 VKHDW++M EAVQNHIGSLNWGYRVALREKKV YENAYG+F+GPHRIK + + + Sbjct 408929 AVKHDWEKMTEAVQNHIGSLNWGYRVALREKKVTYENAYGEFVGPHRIKVIV*QPECLCF 408750 Query 303 SAERFLIATGERPR 316 + + GE R Sbjct 408749 VCLKLCLGAGEEKR 408708 Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 44/46 (96%), Positives = 46/46 (100%), Gaps = 0/46 (0%) Frame = -3 Query 583 ERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEV 628 ERVVGFHVLGPNAGEVTQGFAAA+KCGLTK+QLDSTIGIHPVCAEV Sbjct 389379 ERVVGFHVLGPNAGEVTQGFAAAVKCGLTKQQLDSTIGIHPVCAEV 389242 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 41/57 (72%), Positives = 49/57 (86%), Gaps = 1/57 (2%) Frame = -1 Query 501 RLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFW 557 R L L++ ST +CDYENVPTTVFTPLEYG+CGLSEEKAVEKFGEENIEV +++ + Sbjct 395285 RFLMS*LFS-STKQCDYENVPTTVFTPLEYGSCGLSEEKAVEKFGEENIEVSYTFHY 395118 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 36/40 (90%), Positives = 37/40 (93%), Gaps = 0/40 (0%) Frame = -1 Query 204 GLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEET 243 GLGGTCVNVGCIPKKLMHQAALLGQALQDSR YGW + ET Sbjct 412742 GLGGTCVNVGCIPKKLMHQAALLGQALQDSRTYGWNIGET 412623 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 36/37 (97%), Positives = 37/37 (100%), Gaps = 0/37 (0%) Frame = -2 Query 293 TNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCIS 329 TNNKGKEKIYSAERFLIATGERPRYLGIPGD+EYCIS Sbjct 408397 TNNKGKEKIYSAERFLIATGERPRYLGIPGDREYCIS 408287 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 29/37 (78%), Positives = 32/37 (86%), Gaps = 0/37 (0%) Frame = -2 Query 550 EVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVV 586 ++YHSYFWPLEW IPSRDNNKCYAKI+CN KDN V Sbjct 394237 QIYHSYFWPLEWAIPSRDNNKCYAKIVCNIKDNVSAV 394127 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 33/60 (55%), Positives = 36/60 (60%), Gaps = 7/60 (12%) Frame = -1 Query 31 AKDHHPGKTLPEN-------PAGFTSTATADSRALLQAYIDGHSVVIFSRSTCTRCTEVK 83 AKDH P + LPEN P G +STATAD L AYID H VV FS S C RC EV+ Sbjct 467399 AKDHLPSQALPENAATGVSGPCGPSSTATADPMIRLWAYIDSHPVVSFSHSMCKRCAEVR 467220 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 31/48 (65%), Positives = 35/48 (73%), Gaps = 3/48 (6%) Frame = -1 Query 102 EDGRALEGTLSELAAETDLPVVFVKQRKIGGHGPTLKAYQEGRLQKLL 149 EDG ALEG SEL +ETD+PVV VK+R IGGHG TLK GR Q+ L Sbjct 436241 EDGGALEGARSELTSETDVPVVLVKRRNIGGHGSTLKV---GRRQRFL 436107 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/32 (91%), Positives = 30/32 (94%), Gaps = 0/32 (0%) Frame = -1 Query 406 VEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTV 437 VEQIEAGTPGRLRVVAQST+S E IEGEYNTV Sbjct 404300 VEQIEAGTPGRLRVVAQSTSSGETIEGEYNTV 404205 Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 25/26 (96%), Positives = 26/26 (100%), Gaps = 0/26 (0%) Frame = -3 Query 437 VMLAIGRDACTRKIGLETVGVKINEK 462 V+LAIGRDACTRKIGLETVGVKINEK Sbjct 403617 VLLAIGRDACTRKIGLETVGVKINEK 403540 Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 21/26 (81%), Positives = 24/26 (92%), Gaps = 0/26 (0%) Frame = -1 Query 139 AYQEGRLQKLLKMNGPEDLPKSYDYD 164 AY+EGRLQ+LLKMNG EDL +SYDYD Sbjct 417188 AYEEGRLQRLLKMNGSEDLSESYDYD 417111 Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust. Identities = 17/21 (81%), Positives = 20/21 (95%), Gaps = 0/21 (0%) Frame = -2 Query 81 EVKKLFKSLCVPYFVLELDQT 101 +VKKLFKS+CVPYF+LELDQ Sbjct 462862 QVKKLFKSMCVPYFLLELDQA 462800 Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust. Identities = 19/23 (83%), Positives = 20/23 (87%), Gaps = 0/23 (0%) Frame = -2 Query 627 EVFTTLSVTKRSGASILQAGCXG 649 +VFTTLSVTKRSG ILQAGC G Sbjct 379648 KVFTTLSVTKRSGGDILQAGC*G 379580 Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust. Identities = 16/17 (94%), Positives = 17/17 (100%), Gaps = 0/17 (0%) Frame = -2 Query 188 VMVLDFVTPTPLGTRWG 204 V+VLDFVTPTPLGTRWG Sbjct 415621 VLVLDFVTPTPLGTRWG 415571 > JSZB01000602.1 Manis javanica isolate MP_PG03-UM SCAFFOLD674, whole genome shotgun sequence Length=164803 Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 64/78 (82%), Positives = 74/78 (95%), Gaps = 0/78 (0%) Frame = +1 Query 330 SDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEH 389 SDDLFSLPYCPGKTLVVGASYVALECAGFLAG+GLDVT+MVRSILLRGFDQ+MA K+G + Sbjct 143617 SDDLFSLPYCPGKTLVVGASYVALECAGFLAGLGLDVTIMVRSILLRGFDQEMAEKVGSY 143796 Query 390 MEEHGIKFIRQFVPIKVE 407 ME++G+KFIR+FVP+ V Sbjct 143797 MEQYGVKFIRKFVPVMVS 143850 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 39/56 (70%), Positives = 47/56 (84%), Gaps = 0/56 (0%) Frame = +2 Query 460 NEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKC 515 + ++GKIPV D EQTNVPY+YAIGDILE K+ELTPVAIQAG+LLA+RL+ G K Sbjct 150641 SNRSGKIPVNDMEQTNVPYVYAIGDILEGKIELTPVAIQAGKLLARRLFGGRLEKV 150808 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 30/49 (61%), Positives = 41/49 (84%), Gaps = 0/49 (0%) Frame = +3 Query 243 TVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIK 291 +VKH+W+ M EA+QNHIGSLNW YR++LREK V Y N+YG+F+ H++K Sbjct 141084 SVKHNWETMTEAIQNHIGSLNWSYRLSLREKSVAYINSYGEFVEHHKLK 141230 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 32/39 (82%), Positives = 35/39 (90%), Gaps = 0/39 (0%) Frame = +2 Query 204 GLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEE 242 GLGGTCVNVGCIPKKLMHQAALLGQAL DSR +GW+ + Sbjct 136283 GLGGTCVNVGCIPKKLMHQAALLGQALTDSRKFGWEYNQ 136399 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/58 (60%), Positives = 40/58 (69%), Gaps = 8/58 (14%) Frame = +1 Query 290 IKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDD--------LFSLPYC 339 KATN KG+E Y+A +F+IATGERPRYLGIPGDKEYCI+ D LF P C Sbjct 142771 FKATNRKGQETCYTAAKFVIATGERPRYLGIPGDKEYCITR*D*IDCFNCKLFLFPVC 142944 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 28/38 (74%), Positives = 34/38 (89%), Gaps = 0/38 (0%) Frame = +3 Query 514 KCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEV 551 +CDY +VPTTVFTPLEYG CGLSEEKA+E + +EN+EV Sbjct 154107 QCDYTSVPTTVFTPLEYGCCGLSEEKAIEMYQKENLEV 154220 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 23/36 (64%), Positives = 27/36 (75%), Gaps = 0/36 (0%) Frame = +2 Query 549 IEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNER 584 +V+H+ FWPLEWT+ RDNN CY KIICN DN R Sbjct 162338 FQVFHTLFWPLEWTVAGRDNNTCYTKIICNKSDNVR 162445 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/26 (77%), Positives = 25/26 (96%), Gaps = 0/26 (0%) Frame = +2 Query 437 VMLAIGRDACTRKIGLETVGVKINEK 462 V+LA+GRD+CTRKIGLE +GVKINE+ Sbjct 150002 VLLAVGRDSCTRKIGLEKIGVKINEQ 150079 Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust. Identities = 21/37 (57%), Positives = 28/37 (76%), Gaps = 0/37 (0%) Frame = +3 Query 403 PIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVML 439 P V+Q+E G+PG+L+VVA+ST E +EG YNTV L Sbjct 144954 PY*VQQLEKGSPGKLKVVAKSTEGPETMEGVYNTVSL 145064 > JSZB01007020.1 Manis javanica isolate MP_PG03-UM SCAFFOLD8069, whole genome shotgun sequence Length=615252 Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 75/188 (40%), Positives = 113/188 (60%), Gaps = 9/188 (5%) Frame = +2 Query 451 GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYA- 509 L +G++ ++K G I V + + TNV IYA+GD+ + LTPVAI AGR LA RL+ Sbjct 214469 NLNKLGIQTDDK-GHILVDEFQNTNVKGIYAVGDVC-GRALLTPVAIAAGRKLAHRLFEY 214642 Query 510 GSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTI-----P 564 K DY+N+PT VF+ G GL+E++A+ K+G+EN+++Y + F P+ + Sbjct 214643 KEDSKLDYDNIPTVVFSHPPIGTVGLTEDEAIYKYGKENVKIYSTTFTPMYHAVTKRKTK 214822 Query 565 SRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPV 624 + KC K++C K+ E+VVG H+ G ++ QGFA A+K G TK D+T+ IHP Sbjct 214823 XKRKTKCVMKMVCVDKE-EKVVGIHMQGIACDKMLQGFAIAVKTGATKADFDNTVAIHPT 214999 Query 625 CAEVFTTL 632 +E TL Sbjct 215000 SSEELVTL 215023 > JSZB01010522.1 Manis javanica isolate MP_PG03-UM SCAFFOLD12354, whole genome shotgun sequence Length=168235 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 36/47 (77%), Positives = 41/47 (87%), Gaps = 0/47 (0%) Frame = +2 Query 582 NERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEV 628 RV+GFH+LGP+AGEVTQGFAAA+KCGLTK+ LD TIGIHP C EV Sbjct 6719 KNRVIGFHILGPSAGEVTQGFAAAMKCGLTKQLLDDTIGIHPTCGEV 6859 > JSZB01015288.1 Manis javanica isolate MP_PG03-UM SCAFFOLD18446, whole genome shotgun sequence Length=753688 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 33/49 (67%), Positives = 40/49 (82%), Gaps = 0/49 (0%) Frame = -2 Query 200 GTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDW 248 GT WGLGGTCVNVGCIPKKLMHQAALLG ++D+ +YGW++ + H W Sbjct 572481 GTTWGLGGTCVNVGCIPKKLMHQAALLGTMIRDAPHYGWELAQPTPHSW 572335 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/30 (80%), Positives = 27/30 (90%), Gaps = 0/30 (0%) Frame = -1 Query 351 VALECAGFLAGIGLDVTVMVRSILLRGFDQ 380 VALECAGFL G+GLD T+M+RSI LRGFDQ Sbjct 557392 VALECAGFLTGLGLDTTIMMRSIPLRGFDQ 557303 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/33 (70%), Positives = 27/33 (82%), Gaps = 0/33 (0%) Frame = -1 Query 519 NVPTTVFTPLEYGACGLSEEKAVEKFGEENIEV 551 VPTTVFTPLEYG GLSEE AV + G+E++EV Sbjct 542005 QVPTTVFTPLEYGCVGLSEEAAVARHGQEHVEV 541907 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/111 (28%), Positives = 44/111 (40%), Gaps = 53/111 (48%) Frame = -1 Query 550 EVYHSYFWPLEWTIPSRDNNKCYAKI---------------------------------- 575 +VYH+Y+ PLE+T+ RD ++CY K+ Sbjct 540409 QVYHAYYKPLEFTVAERDASQCYIKVSLLLDQDRGVPGGEREGRSWPPGMVSPTWPWMPL 540230 Query 576 -------------------ICNTKDNERVVGFHVLGPNAGEVTQGFAAALK 607 +C + + V+G H LGPNAGEVTQGFA +K Sbjct 540229 GSPGARLRPGRQLTVWFQMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIK 540077 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/94 (30%), Positives = 51/94 (54%), Gaps = 6/94 (6%) Frame = -2 Query 357 GFLAGIGLDV-TVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPG 415 G +G DV T S ++ Q M++ + EHM HG +F+R +P++V ++ G Sbjct 555420 GLFPTLGSDVLTAAWPSHVVLVLLQQMSSLVTEHMAAHGTRFLRGCIPLRVGRLPD---G 555250 Query 416 RLRVVAQSTNSEEIIEGEYNTVMLAIGRDA--CT 447 +L+V + + + G ++TV+ A+G+ A CT Sbjct 555249 QLQVTWEDLTASKENTGTFDTVLWAVGKGAQLCT 555148 Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 0/45 (0%) Frame = -3 Query 605 ALKCGLTKKQLDSTIGIHPVCAEVFTTLSVTKRSGASILQAGCXG 649 A +CG + +Q+ T+GIHP CAE L ++KRSG GC G Sbjct 538418 ACRCGTSYQQVMRTVGIHPTCAEEVAKLRISKRSGLDPTVTGC*G 538284 Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 28/46 (61%), Gaps = 0/46 (0%) Frame = -1 Query 442 GRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILE 487 GR T + LE GV + + K+ V +E T+VP+I+AIGD+ E Sbjct 545173 GRAPETGSLALEKAGVSTDPHSQKVLVDAQEATSVPHIFAIGDVAE 545036 Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust. Identities = 15/24 (63%), Positives = 21/24 (88%), Gaps = 0/24 (0%) Frame = -1 Query 250 RMIEAVQNHIGSLNWGYRVALREK 273 +M EAVQNH+ SLNWG+RV L+++ Sbjct 571810 KMAEAVQNHVKSLNWGHRVQLQDR 571739 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/32 (56%), Positives = 23/32 (72%), Gaps = 0/32 (0%) Frame = -3 Query 489 KVELTPVAIQAGRLLAQRLYAGSTVKCDYENV 520 + ELTP A+ AG+LLAQRL S+ DY+NV Sbjct 542390 RPELTPTAVMAGKLLAQRLCHQSSDLMDYDNV 542295 > JSZB01018391.1 Manis javanica isolate MP_PG03-UM SCAFFOLD22589, whole genome shotgun sequence Length=19364 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 23/49 (47%), Positives = 30/49 (61%), Gaps = 0/49 (0%) Frame = +2 Query 584 RVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFTTL 632 +VVG H+ G E+ QGFA A+K G TK D+T+ IHP +E TL Sbjct 11948 QVVGIHMQGIGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTL 12094 Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust. Identities = 23/46 (50%), Positives = 28/46 (61%), Gaps = 1/46 (2%) Frame = +1 Query 495 VAIQAGRLLAQRLYA-GSTVKCDYENVPTTVFTPLEYGACGLSEEK 539 VAI AGR LA RL+ K DY+N+PT VF+ G GL+E K Sbjct 8632 VAIAAGRKLAHRLFEYKEDSKLDYDNIPTVVFSHPPIGTVGLTEGK 8769 > JSZB01001722.1 Manis javanica isolate MP_PG03-UM SCAFFOLD1911, whole genome shotgun sequence Length=155662 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 34/59 (58%), Gaps = 0/59 (0%) Frame = +3 Query 59 LQAYIDGHSVVIFSRSTCTRCTEVKKLFKSLCVPYFVLELDQTEDGRALEGTLSELAAE 117 LQ I + VVIFS+++C+ CT K LF + V Y V+ELD E G + L ++ E Sbjct 83532 LQETISNNCVVIFSKTSCSYCTMAKNLFHDMNVNYEVVELDMLEYGSQFQDALYKMTGE 83708 > JSZB01061420.1 Manis javanica isolate MP_PG03-UM SCAFFOLD97828, whole genome shotgun sequence Length=2593 Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust. Identities = 23/61 (38%), Positives = 31/61 (51%), Gaps = 0/61 (0%) Frame = -3 Query 202 RWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGS 261 R LGGTCVNVGC+P K+M +AA + + Q S G D R++ Q + Sbjct 215 RGTLGGTCVNVGCVPSKIMIRAAHIARLRQASPFDGGVSAVAPAIDRPRLLAQQQARVDE 36 Query 262 L 262 L Sbjct 35 L 33 > JSZB01020934.1 Manis javanica isolate MP_PG03-UM SCAFFOLD26129, whole genome shotgun sequence Length=45746 Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 3/61 (5%) Frame = -1 Query 417 LRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNV 476 R+ A S E+I + +++ IGR T+ +GLE +G++++ K G+IPV QT + Sbjct 37694 FRIEAASGGKAEVIT--CDVLLVCIGRRPFTQNLGLEELGIELDPK-GRIPVNTRFQTKI 37524 Query 477 P 477 P Sbjct 37523 P 37521 Lambda K H a alpha 0.318 0.137 0.411 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 429094292480 Database: /export/cursos/20428/BI/genomes/2016/Manis_javanica/genome.fa Posted date: Oct 21, 2016 4:42 PM Number of letters in database: 2,547,379,330 Number of sequences in database: 80,669 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40