------- SECIS element -- id:1 -- grade:A ---- Chromosome = JSZB01008296.1:subseq_450000,123000_ Strand = - Positions = 67221 - 67139 Found by: Infernal (score=27.55) Covels (score=28.49) Stem2 length = 9 Apical loop length = 18 Insertion in stem2 = 0, 0 Free Energy = -13.77 ..(((((((..........(((((((((((((((...............)))))))))))))))............))))))).. model uucggucaugcg---UuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu---u-uuucaugaccggc ..(((((((..........{[[{(((((((((.......-...........)))))))))}]]}........-...))))))).. target AGCUUUCUACUUGCAUUAAUGAGAACAGAAACAGAAACU-AUGACCUAGGGGUUUCUGUUGGAUAGUUAGCA-AUUUAGAAAGGA **** ^^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = JSZB01008296.1:subseq_450000,123000_ Strand = - Positions = 106970 - 106888 Found by: Infernal (score=12.89) Covels (score=1.13) Stem2 length = 9 Apical loop length = 23 Insertion in stem2 = 0, 0 Free Energy = -5.6 ..(((((((.......((((((((((.(((((.....................))))).)))))))))).........))))))).. model uucggucaugcgUuaAUGAcGgccug-gcccuAAAcC------cuuuuuggggcgggc-caggcCuGAUGuuu-uuucaugaccggc .((({{(((---....([[[((([({{((((.......................))))}})])))]]]).....-...)))}}))). target UAGGCUUUG---CAAAUGAAGGUAAUUAACCCAAAUGGAACCUCUGACGGGUGAGGUUUCUGGCUGGAAAGGUU-UUCUAAUUCCUC **** ^^^ ****