genewise output
Score 45.95 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000038_2.0   65 LFVNVAAYXGLA-AQYPELNALQEELKNFGVIVLAFPCNQFGKQEPGTN 
                     L VNVA+   L    Y  L  L +E   F   VLAFPCNQFG+ EP  + 
                     LVVNVASDCQLTDRNYLALQELHKEFGPFHFSVLAFPCNQFGESEPRPS 
JSZB01002610.1:50174 cggaggagtccagaattgccgccagtgctctagtgtctactggtgccca 
                     tttatcgagatcagaatctaataaatgctatgttctcgaatgacacgcg 
                     atacgttccacacatcaaggagcagtaacccccgttactgtaagaccac 


SPP00000038_2.0  113 SEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLK         
                      EI+   +       +  +F +F K  + G + +  F FL          
                     KEIVSFAR-----NNYGVTFPIFHKIKILGSEAEPAFRFLV         
JSZB01002610.1:50321 agagttga     aatggatcatcaaaacgtgggcgtatcg         
                     aattctcg     aaagtctcttaatattgcacacctgttt         
                     gaagttaa     tccaaacccccgtgtaataaatatattt         


SPP00000038_2.0  154                           SCPPTSD---LLGSSSQLFWEPM 
                                                   T +   L+   S ++     
                               N:E[gaa]        MKILTKNKIMLMKIYSDILDSSK 
JSZB01002610.1:50429 GGTAAATA  Intron 1   CAGAAaaataaaaaacaaattgatgtta 
                      <1-----[50430:53457]-1>  tattcaaattttatacattacca 
                                               gacgaatatgcgaattttattga 


SPP00000038_2.0  175 KVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQF      
                     K    RWNF K+LV P+G  V  W  + PV  ++ +I   ++Q+      
                     K--EPRWNFWKYLVNPEGQVVNSWRPEEPVEVIRPEIAALIRQM      
JSZB01002610.1:53529 a  gcatattatcgacggcggattacggcgggaacgaggcaaca      
                     a  acggatgaattacagattacggcaactattgcatccttgat      
                     g  aaggttgatgcctgtatgccggagactatcgtgaatgtaag      


//
Making a E in phase 1 intron
>JSZB01002610.1:subseq(335000,100000).pep
LVVNVASDCQLTDRNYLALQELHKEFGPFHFSVLAFPCNQFGESEPRPSKEIVSFARNNY
GVTFPIFHKIKILGSEAEPAFRFLVEMKILTKNKIMLMKIYSDILDSSKKEPRWNFWKYL
VNPEGQVVNSWRPEEPVEVIRPEIAALIRQM
//
>JSZB01002610.1:subseq(335000,100000).[50174:53654].sp
CTAGTTGTAAACGTGGCTAGTGACTGCCAACTCACAGACAGAAATTACTTAGCACTGCAG
GAACTGCACAAAGAGTTTGGACCATTCCACTTCAGCGTCTTGGCTTTTCCATGCAATCAG
TTTGGAGAATCGGAACCCCGCCCAAGCAAGGAAATAGTGTCTTTTGCAAGAAATAACTAC
GGAGTAACATTCCCCATCTTCCACAAGATTAAGATTCTAGGATCTGAAGCAGAACCTGCA
TTTAGATTTCTTGTTGAAATGAAAATCTTGACAAAAAATAAAATTATGCTCATGAAAATA
TATTCTGATATTTTAGATTCTTCGAAAAAGGAACCAAGGTGGAATTTTTGGAAATATCTG
GTCAACCCTGAGGGTCAAGTTGTGAACTCCTGGAGGCCAGAGGAACCCGTTGAAGTTATC
AGGCCTGAGATAGCAGCTCTGATTAGACAAATG
//
JSZB01002610.1:subseq(335000,100000)	GeneWise	match	50174	53654	52.94	+	.	JSZB01002610.1:subseq(335000,100000)-genewise-prediction-1
JSZB01002610.1:subseq(335000,100000)	GeneWise	cds	50174	50429	0.00	+	0	JSZB01002610.1:subseq(335000,100000)-genewise-prediction-1
JSZB01002610.1:subseq(335000,100000)	GeneWise	intron	50430	53457	0.00	+	.	JSZB01002610.1:subseq(335000,100000)-genewise-prediction-1
JSZB01002610.1:subseq(335000,100000)	GeneWise	cds	53458	53654	0.00	+	2	JSZB01002610.1:subseq(335000,100000)-genewise-prediction-1
//