Command line: [exonerate -m p2g --showtargetgff -q GPx1.fa -t GPx1.subseq2.fa]
Hostname: [ws101066u]

C4 Alignment:
------------
         Query: SPP00000017_2.0 # Protein # Glutathione peroxidase 1 (GPx1) # Human 
        Target: JSZB01017608.1 Manis javanica isolate MP_PG03-UM SCAFFOLD21543, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 196
   Query range: 46 -> 118
  Target range: 46966 -> 47182

    47 : SerLeuUnkGlyThrThrValArgAspTyrThrGlnMetAsnGluLeuGlnArgArgLeu :    66
         |||  !...  !|||! !|||!:!||||||||||||! !|||:!!||||||||| !!|||
         SerAlaSerLysThrArgValGlnAspTyrThrGlnLysAsnLysLeuGlnArgCysLeu
 46967 : AGTGCTTCTAAAACAAGGGTCCAGGACTACACTCAGAAGAACAAGCTGCAGAGGTGCCTC : 47024

    67 : GlyProArgGlyLeuValValLeuGlyPheProCysAsnGlnPheGlyHisGlnGluAsn :    86
         .!!|||||||||:!!|||||||||||||||! !! !||||||||||||! !|||||||||
         SerProArgGlyValValValLeuGlyPheLeuTyrAsnGlnPheGlyProGlnGluAsn
 47025 : AGTCCCAGGGGTGTGGTGGTTCTTGGCTTCCTGTACAATCAATTTGGGCCTCAAGAGAAT : 47084

    87 : AlaLysAsnGluGluIleLeuAsnSerLeuLysTyrValArgProGlyGlyGlyPheGlu :   106
         |||||| !!:!!|||! !|||:!!! !|||!!.|||:!!!:!! !! !.!! !!!!.|||
         AlaLysTyrLysGluAsnLeuAspPheLeuAsnTyrMetGlnLeuAspSerArgLeuGlu
 47085 : GCCAAGTACAAAGAGAATCTGGATTTCCTCAACTATATGCAACTGGACAGCAGATTGGAG : 47144

   107 : ProAsnPheMetLeuPheGluLysCysGluValAsn :   118
          !!||||||!  ||||||:!!!!.||||||:!!|||
         SerAsnPheThrLeuPheLysAsnCysGluLeuAsn
 47145 : TCCAACTTCACACTCTTTAAGAACTGTGAGCTGAAT : 47182

vulgar: SPP00000017_2.0 46 118 . JSZB01017608.1 46966 47182 + 196 M 72 216
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2016-11-22
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
JSZB01017608.1	exonerate:protein2genome:local	gene	46967	47182	196	+	.	gene_id 1 ; sequence SPP00000017_2.0 ; gene_orientation .
JSZB01017608.1	exonerate:protein2genome:local	cds	46967	47182	.	+	.	
JSZB01017608.1	exonerate:protein2genome:local	exon	46967	47182	.	+	.	insertions 0 ; deletions 0
JSZB01017608.1	exonerate:protein2genome:local	similarity	46967	47182	196	+	.	alignment_id 1 ; Query SPP00000017_2.0 ; Align 46967 47 216
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis