TBLASTN 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: /export/cursos/20428/BI/genomes/2016/Manis_javanica/genome.fa 80,669 sequences; 2,547,379,330 total letters Query= SPP00000146_2.0 # Protein # tRNA Sec 1 associated protein 1 (SECp43) # Human Length=287 Score E Sequences producing significant alignments: (Bits) Value JSZB01005395.1 Manis javanica isolate MP_PG03-UM SCAFFOLD6155, ... 83.6 5e-40 JSZB01010479.1 Manis javanica isolate MP_PG03-UM SCAFFOLD12307,... 97.1 5e-20 JSZB01006717.1 Manis javanica isolate MP_PG03-UM SCAFFOLD7713, ... 77.0 1e-13 JSZB01029013.1 Manis javanica isolate MP_PG03-UM SCAFFOLD37917,... 63.5 3e-09 JSZB01054355.1 Manis javanica isolate MP_PG03-UM SCAFFOLD81393,... 63.2 5e-09 JSZB01006733.1 Manis javanica isolate MP_PG03-UM SCAFFOLD7731, ... 55.8 9e-07 JSZB01011836.1 Manis javanica isolate MP_PG03-UM SCAFFOLD14007,... 52.0 2e-05 JSZB01009229.1 Manis javanica isolate MP_PG03-UM SCAFFOLD10779,... 52.0 2e-05 JSZB01071849.1 Manis javanica isolate MP_PG03-UM C40868897, who... 51.2 2e-05 JSZB01006850.1 Manis javanica isolate MP_PG03-UM SCAFFOLD7871, ... 48.9 2e-04 JSZB01014156.1 Manis javanica isolate MP_PG03-UM SCAFFOLD17002,... 39.3 0.22 JSZB01001818.1 Manis javanica isolate MP_PG03-UM SCAFFOLD2024, ... 38.9 0.24 JSZB01008937.1 Manis javanica isolate MP_PG03-UM SCAFFOLD10425,... 38.1 0.45 JSZB01036768.1 Manis javanica isolate MP_PG03-UM SCAFFOLD49779,... 38.1 0.54 JSZB01004296.1 Manis javanica isolate MP_PG03-UM SCAFFOLD4871, ... 36.6 1.4 JSZB01000466.1 Manis javanica isolate MP_PG03-UM SCAFFOLD522, w... 36.2 1.7 JSZB01008444.1 Manis javanica isolate MP_PG03-UM SCAFFOLD9815, ... 36.2 2.0 JSZB01009390.1 Manis javanica isolate MP_PG03-UM SCAFFOLD10983,... 35.0 4.2 JSZB01000913.1 Manis javanica isolate MP_PG03-UM SCAFFOLD1007, ... 34.7 6.0 JSZB01007152.1 Manis javanica isolate MP_PG03-UM SCAFFOLD8223, ... 34.3 8.5 > JSZB01005395.1 Manis javanica isolate MP_PG03-UM SCAFFOLD6155, whole genome shotgun sequence Length=237895 Score = 83.6 bits (205), Expect(4) = 5e-40, Method: Compositional matrix adjust. Identities = 40/64 (63%), Positives = 46/64 (72%), Gaps = 0/64 (0%) Frame = +1 Query 1 MAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEK 60 M ASLWMGD+EPY+ + ISRAFAT+GET+ S +II N TGIPA FVEF LA EK Sbjct 105973 MEASLWMGDMEPYVYKRVISRAFATLGETIKSTEIILNNFTGIPAHS*FVEFRHLAIVEK 106152 Query 61 CLHK 64 LH Sbjct 106153 HLHN 106164 Score = 72.4 bits (176), Expect(4) = 5e-40, Method: Compositional matrix adjust. Identities = 44/84 (52%), Positives = 51/84 (61%), Gaps = 6/84 (7%) Frame = +3 Query 77 KRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVS 136 K FKLN+ K D SPEYS + P FFV +YPS +GG V+LDQ GVS Sbjct 106200 KCFKLNW----KITD*SPEYSF*KAN--PRCG*WHTI*FFVNIYPSTQGGMVILDQMGVS 106361 Query 137 KGYGFVKFTDELEQKRALTECQGA 160 K YGFV+F DELEQK+ LTE Q Sbjct 106362 KVYGFVRFQDELEQKQTLTEYQST 106433 Score = 45.4 bits (106), Expect(4) = 5e-40, Method: Compositional matrix adjust. Identities = 23/34 (68%), Positives = 24/34 (71%), Gaps = 0/34 (0%) Frame = +3 Query 254 NKEFMEQSEELYDALMDCHWQPLDTVSSEIPAMM 287 +KE EQSE L DAL D H QPL TVSSEI A M Sbjct 106692 DKESREQSEALCDALTDSHQQPLHTVSSEISATM 106793 Score = 28.1 bits (61), Expect(4) = 5e-40, Method: Compositional matrix adjust. Identities = 53/90 (59%), Positives = 62/90 (69%), Gaps = 6/90 (7%) Frame = +2 Query 162 GLGSKPVRLSVAIPKASRVKPVEysqmysysynqyyqqyqnyyAQWGYDQNtgsysysyp 221 GLG +AIPK VKPVEYS MY Y Y+ QQ+ NY A WG D NTGS+SY+YP Sbjct 106439 GLG---FDWCMAIPKVRLVKPVEYS*MYIYRYSWCCQQF*NYSA*WGCD*NTGSHSYAYP 106609 Query 222 qygytqstMQTYEEVGDDALEDPMPQLDVT 251 QYG+TQSTM TYE+ G+D L D +LDVT Sbjct 106610 QYGHTQSTMGTYED-GEDVLGD--CKLDVT 106690 > JSZB01010479.1 Manis javanica isolate MP_PG03-UM SCAFFOLD12307, whole genome shotgun sequence Length=646088 Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 45/45 (100%), Positives = 45/45 (100%), Gaps = 0/45 (0%) Frame = -3 Query 243 DPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIPAMM 287 DPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIPAMM Sbjct 484272 DPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIPAMM 484138 Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 45/45 (100%), Positives = 45/45 (100%), Gaps = 0/45 (0%) Frame = -3 Query 93 SPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSK 137 SPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSK Sbjct 496716 SPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSK 496582 Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 40/41 (98%), Positives = 41/41 (100%), Gaps = 0/41 (0%) Frame = -2 Query 137 KGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKA 177 +GYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKA Sbjct 495553 RGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKA 495431 Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 33/38 (87%), Positives = 35/38 (92%), Gaps = 0/38 (0%) Frame = -1 Query 43 IPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFK 80 IPAGYCFVEFADLATAEKCLHKINGKPLPGATP + + Sbjct 498869 IPAGYCFVEFADLATAEKCLHKINGKPLPGATPVRTLR 498756 Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/40 (88%), Positives = 36/40 (90%), Gaps = 0/40 (0%) Frame = -1 Query 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTG 42 A+L LEPYMDENFISRAFATMGETVMSVKIIRNRLTG Sbjct 502943 AALVYTQLEPYMDENFISRAFATMGETVMSVKIIRNRLTG 502824 Score = 39.7 bits (91), Expect = 0.17, Method: Compositional matrix adjust. Identities = 17/17 (100%), Positives = 17/17 (100%), Gaps = 0/17 (0%) Frame = -2 Query 76 AKRFKLNYATYGKQPDN 92 AKRFKLNYATYGKQPDN Sbjct 498154 AKRFKLNYATYGKQPDN 498104 > JSZB01006717.1 Manis javanica isolate MP_PG03-UM SCAFFOLD7713, whole genome shotgun sequence Length=286180 Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/182 (30%), Positives = 90/182 (49%), Gaps = 9/182 (5%) Frame = -2 Query 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62 ASL++GDL + E+ + + F+ +G V+S++I R+ +T GY +V F LA A+K L Sbjct 30618 ASLYVGDLHADVTEDLLFKKFSAVG-PVLSIRICRDLITRRSLGYAYVNFLQLADAQKAL 30442 Query 63 HKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPS 122 +N + G K +L ++ S ++F+ +L +D+ L+E F + Sbjct 30441 DMMNFDDVKG----KSIRLMWSQRDDYLRKSGIGNVFIKNLDKSIDNKTLHEHF-SAFGK 30277 Query 123 CRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRVKP 182 KV+ D S+GY FV F +++ RA+ E G + K RL V K R + Sbjct 30276 ILSSKVMSDDDQGSRGYAFVHFQNQVAADRAIKEMNGTL---LKDCRLFVGRFKNRRDRE 30106 Query 183 VE 184 E Sbjct 30105 AE 30100 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/158 (27%), Positives = 79/158 (50%), Gaps = 5/158 (3%) Frame = -2 Query 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63 ++++ +L+ +D + F+ G+ ++S K++ + G GY FV F + A++ + Sbjct 30351 NVFIKNLDKSIDNKTLHEHFSAFGK-ILSSKVMSDDDQG-SRGYAFVHFQNQVAADRAIK 30178 Query 64 KINGKPLPGATP-AKRFKLNYATYGKQPDNSPEYS-LFVGDLTPDVDDGMLYEFFVKVYP 121 ++NG L RFK + + + E++ ++V + D+DD L E F + Y Sbjct 30177 EMNGTLLKDCRLFVGRFKNRRDREAELRNRANEFTNVYVKNFGDDMDDESLKEVFSQ-YG 30001 Query 122 SCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQG 159 KV+ D +G SKG+GFV F K+A+ + G Sbjct 30000 KTLSVKVMTDNSGKSKGFGFVSFDSHEAAKKAVEKMNG 29887 > JSZB01029013.1 Manis javanica isolate MP_PG03-UM SCAFFOLD37917, whole genome shotgun sequence Length=14794 Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 28/42 (67%), Positives = 34/42 (81%), Gaps = 0/42 (0%) Frame = -2 Query 243 DPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIP 284 DP L+V E N +FM +SEELYD+LM+CHWQPLDTV S+IP Sbjct 5295 DPNLHLNVEELNTKFMVKSEELYDSLMNCHWQPLDTVYSKIP 5170 > JSZB01054355.1 Manis javanica isolate MP_PG03-UM SCAFFOLD81393, whole genome shotgun sequence Length=30635 Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 42/157 (27%), Positives = 77/157 (49%), Gaps = 7/157 (4%) Frame = +2 Query 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62 ASL++GDL P + E + F+ G ++S++I R+++T GY +V + A++ L Sbjct 29807 ASLYVGDLHPEVTEAMLYEKFSPAG-PILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 29983 Query 63 HKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPS 122 +N + G + ++ ++ S ++F+ +L +D+ LY F + + Sbjct 29984 ETLNFDVIKG----RPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIF-SAFGN 30148 Query 123 CRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQG 159 KV D+ G KGYGFV F + +RA+ G Sbjct 30149 ILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNG 30256 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 42/78 (54%), Gaps = 3/78 (4%) Frame = +2 Query 94 PEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKR 152 P SL+VGDL P+V + MLYE F P ++ D+ T S GY +V + ++ KR Sbjct 29801 PMASLYVGDLHPEVTEAMLYEKFSPAGPIL-SIRICRDKITRRSLGYAYVNYQQPVDAKR 29977 Query 153 ALTECQGAVGLGSKPVRL 170 AL V + +PVR+ Sbjct 29978 ALETLNFDV-IKGRPVRI 30028 > JSZB01006733.1 Manis javanica isolate MP_PG03-UM SCAFFOLD7731, whole genome shotgun sequence Length=313463 Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 76/160 (48%), Gaps = 7/160 (4%) Frame = +3 Query 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62 ++++ +L+ +D + F+ G ++S K++ + GY +V F LA A + + Sbjct 161124 GNIFIKNLDKSIDNRALFYLFSAFG-NILSCKVVCD--DNGSKGYAYVHFDSLAAANRAI 161294 Query 63 HKINGKPLPG-ATPAKRFKL--NYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKV 119 +NG L RFK A + D + ++FV + D+DD L E F + Sbjct 161295 WHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNFGDDMDDEKLEEIFSEY 161474 Query 120 YPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQG 159 P+ KV+ D G SKG+GFV++ ++A+ + G Sbjct 161475 GPT-ESVKVIRDANGKSKGFGFVRYETHEAAQKAVLDLHG 161591 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 16/166 (10%) Frame = +3 Query 7 MGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKIN 66 +GDL+P + E+ + + F G + +I R+ +T P GY +V F A AE L+ +N Sbjct 160872 VGDLDPDVTEDMLYKKFRPAGPLRFT-RICRDPMTRSPLGYGYVNFRFPADAEWALNTMN 161048 Query 67 GKPLPGATPAKRFKLNYATYGKQPDNSPEYS----LFVGDLTPDVDDGMLYEFFVKVYPS 122 + G K F+L ++ QPD+ S +F+ +L +D+ L+ F + + Sbjct 161049 FDLING----KPFRLMWS----QPDDRLRKSGVGNIFIKNLDKSIDNRALFYLF-SAFGN 161201 Query 123 CRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPV 168 KVV D G SKGY +V F RA+ G V L ++ V Sbjct 161202 ILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNG-VRLNNRQV 161333 > JSZB01011836.1 Manis javanica isolate MP_PG03-UM SCAFFOLD14007, whole genome shotgun sequence Length=218787 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 69/141 (49%), Gaps = 19/141 (13%) Frame = +2 Query 46 GYCFVEF-----ADLATAEKCLHKINGKPLPGATPAKRFKLNYAT-YGKQPDNSPEYSLF 99 GY FVEF AD A + K+ GKP+ ++N A+ + K D ++F Sbjct 184541 GYGFVEFLSEEDADYAIKIMNMIKLYGKPI---------RVNKASAHNKNLDVGA--NIF 184687 Query 100 VGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQ 158 +G+L P++D+ +LY+ F + K++ D TG SKGY F+ F + A E Sbjct 184688 IGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFA-SFDASDAAIEAM 184864 Query 159 GAVGLGSKPVRLSVAIPKASR 179 L ++P+ +S A K S+ Sbjct 184865 NGQYLCNRPITVSYAFKKDSK 184927 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 41/70 (59%), Gaps = 0/70 (0%) Frame = +2 Query 1 MAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEK 60 + A++++G+L+P +DE + F+ G + + KI+R+ TG GY F+ FA ++ Sbjct 184670 VGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDA 184849 Query 61 CLHKINGKPL 70 + +NG+ L Sbjct 184850 AIEAMNGQYL 184879 > JSZB01009229.1 Manis javanica isolate MP_PG03-UM SCAFFOLD10779, whole genome shotgun sequence Length=507950 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 44/76 (58%), Gaps = 2/76 (3%) Frame = -2 Query 89 QPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDE 147 P + ++ +F GDL +V+D +L F + +PS KV+ D +TG +KGYGFV F D Sbjct 442093 SPPTTDDFRIFCGDLGNEVNDDILARAFSR-FPSFLKAKVIRDKRTGKTKGYGFVSFKDP 441917 Query 148 LEQKRALTECQGAVGL 163 + RA+ E G GL Sbjct 441916 SDYVRAMREMNGG*GL 441869 > JSZB01071849.1 Manis javanica isolate MP_PG03-UM C40868897, whole genome shotgun sequence Length=1618 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 50/80 (63%), Gaps = 4/80 (5%) Frame = -3 Query 97 SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 156 ++FVG + +D+ + FF + Y S + K++ D+TGVSKGYGFV F ++++ ++ + E Sbjct 710 TIFVGGIDVRMDETEIRSFFAR-YGSIKEVKIITDRTGVSKGYGFVSFYNDVDVQK-IVE 537 Query 157 CQGAVGLGSKPVRLSVAIPK 176 Q + K ++L +AI K Sbjct 536 SQ--INFHGKKLKLGLAIRK 483 > JSZB01006850.1 Manis javanica isolate MP_PG03-UM SCAFFOLD7871, whole genome shotgun sequence Length=501133 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/30 (70%), Positives = 25/30 (83%), Gaps = 0/30 (0%) Frame = -1 Query 255 KEFMEQSEELYDALMDCHWQPLDTVSSEIP 284 KEFM +SEEL D+LMDCHW PLDT S++P Sbjct 120985 KEFMVKSEELSDSLMDCHW*PLDTFHSKVP 120896 > JSZB01014156.1 Manis javanica isolate MP_PG03-UM SCAFFOLD17002, whole genome shotgun sequence Length=495202 Score = 39.3 bits (90), Expect = 0.22, Method: Compositional matrix adjust. Identities = 26/85 (31%), Positives = 45/85 (53%), Gaps = 3/85 (4%) Frame = -3 Query 96 YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRAL 154 + +FV +L+PD D+ +L++ F + + KV+ D T KG+GFV T+ E A+ Sbjct 193106 WCIFVYNLSPDSDESVLWQLF-GPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 192930 Query 155 TECQGAVGLGSKPVRLSVAIPKASR 179 G LG + +++S KA + Sbjct 192929 ASLNG-YRLGDRVLQVSFKTNKAHK 192858 > JSZB01001818.1 Manis javanica isolate MP_PG03-UM SCAFFOLD2024, whole genome shotgun sequence Length=406778 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 30/80 (38%), Positives = 40/80 (50%), Gaps = 9/80 (11%) Frame = +3 Query 94 PEYSLFVGDLTPDVDDGMLYEFFVKVYP--SCRGGKVVLDQTGVSKGYGFVKFTDELEQK 151 P SL+VGDL PDV + MLYE F P S R + ++ + S GY +V F Q+ Sbjct 354864 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMIPRR--SLGYAYVNF-----QQ 355022 Query 152 RALTECQGAVGLGSKPVRLS 171 A E + G +RLS Sbjct 355023 PADGESRAPRASGRAAMRLS 355082 Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust. Identities = 19/66 (29%), Positives = 35/66 (53%), Gaps = 1/66 (2%) Frame = +3 Query 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62 ASL++GDL P + E + F+ G ++S+++ R+ + GY +V F A E Sbjct 354870 ASLYVGDLHPDVTEAMLYEKFSPAGP-ILSIRVCRDMIPRRSLGYAYVNFQQPADGESRA 355046 Query 63 HKINGK 68 + +G+ Sbjct 355047 PRASGR 355064 Score = 35.0 bits (79), Expect = 4.1, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 32/51 (63%), Gaps = 1/51 (2%) Frame = +3 Query 129 VLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASR 179 V+ + G SKG+GFV F+ E +A+TE G + + +KP+ +++A K R Sbjct 366588 VMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI-VATKPLYVALAQRKEER 366737 > JSZB01008937.1 Manis javanica isolate MP_PG03-UM SCAFFOLD10425, whole genome shotgun sequence Length=199385 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 33/51 (65%), Gaps = 1/51 (2%) Frame = +2 Query 129 VLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASR 179 V+ + G SKG+GFV F+ E +A+TE G + +GSKP+ +++A K R Sbjct 153803 VMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRI-VGSKPLYVALAQRKEER 153952 > JSZB01036768.1 Manis javanica isolate MP_PG03-UM SCAFFOLD49779, whole genome shotgun sequence Length=157957 Score = 38.1 bits (87), Expect = 0.54, Method: Compositional matrix adjust. Identities = 26/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%) Frame = +1 Query 93 SPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQK 151 S + +F+ +L D D+G+L++ F + + KV+ D T KG+GFV T+ E Sbjct 146581 SSGWCIFIYNLGQDADEGILWQMF-GPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAA 146757 Query 152 RALTECQGAVGLGSKPVRLSVAIPKASR 179 A+ G LG K +++S K+ + Sbjct 146758 MAIASLNG-YRLGDKILQVSFKTNKSHK 146838 > JSZB01004296.1 Manis javanica isolate MP_PG03-UM SCAFFOLD4871, whole genome shotgun sequence Length=412836 Score = 36.6 bits (83), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 43/85 (51%), Gaps = 3/85 (4%) Frame = +2 Query 96 YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRAL 154 + +FV +L PD D+ +L++ F + + KV+ D T KG+GFV T+ E A+ Sbjct 193907 WCIFVYNLAPDADESILWQMF-GPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 194083 Query 155 TECQGAVGLGSKPVRLSVAIPKASR 179 G LG + +++S K + Sbjct 194084 ASLNG-YRLGDRVLQVSFKTNKTHK 194155 > JSZB01000466.1 Manis javanica isolate MP_PG03-UM SCAFFOLD522, whole genome shotgun sequence Length=420935 Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust. Identities = 27/70 (39%), Positives = 34/70 (49%), Gaps = 7/70 (10%) Frame = +3 Query 94 PEYSLFVGDLTPDVDDGMLYEFFVKVYP--SCRGGKVVLD-QTGVSKGYGFVKFTDELE- 149 P SL+VGDL PDV + ML++ F P S R V D T S GY +V F + Sbjct 211311 PLASLYVGDLHPDVTEAMLFDKFSPAGPILSIR---VCRDVATRRSLGYAYVNFQQPADG 211481 Query 150 QKRALTECQG 159 + R C G Sbjct 211482 EPRGRARCPG 211511 Score = 35.8 bits (81), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 32/51 (63%), Gaps = 1/51 (2%) Frame = +3 Query 129 VLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASR 179 V+ + G SKG+GFV F+ E +A+TE G + + +KP+ +++A K R Sbjct 225105 VMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRI-ISTKPLYVALAQRKEER 225254 Score = 35.0 bits (79), Expect = 4.8, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (2%) Frame = +3 Query 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAE 59 ASL++GDL P + E + F+ G ++S+++ R+ T GY +V F A E Sbjct 211317 ASLYVGDLHPDVTEAMLFDKFSPAGP-ILSIRVCRDVATRRSLGYAYVNFQQPADGE 211484 > JSZB01008444.1 Manis javanica isolate MP_PG03-UM SCAFFOLD9815, whole genome shotgun sequence Length=305321 Score = 36.2 bits (82), Expect = 2.0, Method: Compositional matrix adjust. Identities = 14/16 (88%), Positives = 14/16 (88%), Gaps = 0/16 (0%) Frame = -2 Query 269 MDCHWQPLDTVSSEIP 284 M CHWQPLDTV SEIP Sbjct 180175 MSCHWQPLDTVQSEIP 180128 > JSZB01009390.1 Manis javanica isolate MP_PG03-UM SCAFFOLD10983, whole genome shotgun sequence Length=151163 Score = 35.0 bits (79), Expect = 4.2, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 2/92 (2%) Frame = -3 Query 71 PGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVL 130 P R L+ T K P +LFV L + L E F + Y R ++V Sbjct 130314 PHDRAVWRAMLSRYTPNKGVTGDPLLTLFVARLNLQTKEEKLKEVFSR-YGDIRRLRLVR 130138 Query 131 DQ-TGVSKGYGFVKFTDELEQKRALTECQGAV 161 D TG SKGY F+++ +E +A + G V Sbjct 130137 DLVTGFSKGYAFIEYKEERSLIKAYRDADGLV 130042 > JSZB01000913.1 Manis javanica isolate MP_PG03-UM SCAFFOLD1007, whole genome shotgun sequence Length=194676 Score = 34.7 bits (78), Expect = 6.0, Method: Compositional matrix adjust. Identities = 14/28 (50%), Positives = 19/28 (68%), Gaps = 0/28 (0%) Frame = -3 Query 256 EFMEQSEELYDALMDCHWQPLDTVSSEI 283 EFM +SE+ YD LM+ HW PL + +I Sbjct 23218 EFMMKSEKFYDFLMNRHWLPLGMIHPKI 23135 > JSZB01007152.1 Manis javanica isolate MP_PG03-UM SCAFFOLD8223, whole genome shotgun sequence Length=167538 Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 3/82 (4%) Frame = +1 Query 96 YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRAL 154 + +FV +L+P+ D+ +L++ F + + KV+ D T KG+GFV T+ E A+ Sbjct 76276 WCIFVYNLSPEADESVLWQLF-GPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAI 76452 Query 155 TECQGAVGLGSKPVRLSVAIPK 176 G LG + +++S K Sbjct 76453 ASLNGYR-LGERVLQVSFKTSK 76515 Lambda K H a alpha 0.317 0.135 0.406 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 132517782436 Database: /export/cursos/20428/BI/genomes/2016/Manis_javanica/genome.fa Posted date: Oct 21, 2016 4:42 PM Number of letters in database: 2,547,379,330 Number of sequences in database: 80,669 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 13 Window for multiple hits: 40